RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 RASSF7Q02833 373 aa15.74■□□□□ 0.11
HLA-DOA-204ENST00000485901 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
HLA-DOA-204ENST00000485901 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
HLA-DOA-204ENST00000485901 NFKBIEO00221 500 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 NEUROD2Q15784 382 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 CLEC4GQ6UXB4 293 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 CNKSR1Q969H4 720 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 TIAM2Q8IVF5 1701 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 ANKRD31Q8N7Z5 1873 aa15.73■□□□□ 0.11
HLA-DOA-204ENST00000485901 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
HLA-DOA-204ENST00000485901 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
HLA-DOA-204ENST00000485901 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
HLA-DOA-204ENST00000485901 SCN7AQ01118 1682 aa15.72■□□□□ 0.11
HLA-DOA-204ENST00000485901 PRELPP51888 382 aa15.71■□□□□ 0.11
HLA-DOA-204ENST00000485901 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.11
HLA-DOA-204ENST00000485901 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
HLA-DOA-204ENST00000485901 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.11
HLA-DOA-204ENST00000485901 ARFGEF2Q9Y6D5 1785 aa15.7■□□□□ 0.1
HLA-DOA-204ENST00000485901 KCNQ3O43525 872 aa15.7■□□□□ 0.1
HLA-DOA-204ENST00000485901 ERFEQ4G0M1 354 aa15.7■□□□□ 0.1
HLA-DOA-204ENST00000485901 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
HLA-DOA-204ENST00000485901 POTECB2RU33 542 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 APAF1O14727 1248 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 ST5P78524 1137 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 HTRA3P83110 453 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 COL13A1Q5TAT6 717 aaPredicted RBP15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 MASTLQ96GX5 879 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 TAOK3Q9H2K8 898 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
HLA-DOA-204ENST00000485901 SCN4AP35499 1836 aa15.68■□□□□ 0.1
HLA-DOA-204ENST00000485901 SRGNP10124 158 aa15.68■□□□□ 0.1
HLA-DOA-204ENST00000485901 CNBD1Q8NA66 436 aa15.68■□□□□ 0.1
HLA-DOA-204ENST00000485901 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
HLA-DOA-204ENST00000485901 BABAM1Q9NWV8 329 aa15.68■□□□□ 0.1
HLA-DOA-204ENST00000485901 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 C21orf2O43822 256 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 BCORQ6W2J9 1755 aa15.67■□□□□ 0.1
HLA-DOA-204ENST00000485901 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
HLA-DOA-204ENST00000485901 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
HLA-DOA-204ENST00000485901 TNS4Q8IZW8 715 aa15.66■□□□□ 0.1
HLA-DOA-204ENST00000485901 DLG5Q8TDM6 1919 aa15.66■□□□□ 0.1
HLA-DOA-204ENST00000485901 SLX4Q8IY92 1834 aa15.66■□□□□ 0.1
HLA-DOA-204ENST00000485901 NPHP1O15259 732 aa15.65■□□□□ 0.1
HLA-DOA-204ENST00000485901 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
HLA-DOA-204ENST00000485901 L3MBTL3Q96JM7 780 aaPredicted RBP15.65■□□□□ 0.1
HLA-DOA-204ENST00000485901 TSPYL4Q9UJ04 414 aa15.65■□□□□ 0.1
HLA-DOA-204ENST00000485901 COL11A2P13942 1736 aaPredicted RBP15.65■□□□□ 0.1
HLA-DOA-204ENST00000485901 A1BGP04217 495 aa15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 HSPA1AP0DMV8 641 aaKnown RBP15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 HSPA1BP0DMV9 641 aaKnown RBP15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 TPTE2Q6XPS3 522 aa15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
HLA-DOA-204ENST00000485901 NPR1P16066 1061 aa15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 CCDC93Q567U6 631 aa15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 C7orf43Q8WVR3 580 aa15.63■□□□□ 0.09
HLA-DOA-204ENST00000485901 CHL1O00533 1208 aa15.62■□□□□ 0.09
HLA-DOA-204ENST00000485901 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
HLA-DOA-204ENST00000485901 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
HLA-DOA-204ENST00000485901 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
HLA-DOA-204ENST00000485901 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
HLA-DOA-204ENST00000485901 PRAMEF22A3QJZ6 481 aa15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 ALDH1B1P30837 517 aa15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 DIEXFQ68CQ4 756 aaKnown RBP15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 CACNA1SQ13698 1873 aa15.61■□□□□ 0.09
HLA-DOA-204ENST00000485901 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
HLA-DOA-204ENST00000485901 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
HLA-DOA-204ENST00000485901 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
HLA-DOA-204ENST00000485901 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
HLA-DOA-204ENST00000485901 PASKQ96RG2 1323 aa15.6■□□□□ 0.09
HLA-DOA-204ENST00000485901 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
HLA-DOA-204ENST00000485901 CC2D2BQ6DHV5 1058 aa15.59■□□□□ 0.09
HLA-DOA-204ENST00000485901 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
HLA-DOA-204ENST00000485901 GNAI1P63096 354 aa15.58■□□□□ 0.08
HLA-DOA-204ENST00000485901 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOA-204ENST00000485901 PRDM10Q9NQV6 1147 aa15.58■□□□□ 0.08
HLA-DOA-204ENST00000485901 IFT57Q9NWB7 429 aa15.58■□□□□ 0.08
HLA-DOA-204ENST00000485901 CNTNAP1P78357 1384 aa15.58■□□□□ 0.08
HLA-DOA-204ENST00000485901 ZNF853P0CG23 659 aa15.57■□□□□ 0.08
HLA-DOA-204ENST00000485901 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
HLA-DOA-204ENST00000485901 PSMD1Q99460 953 aa15.57■□□□□ 0.08
HLA-DOA-204ENST00000485901 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
HLA-DOA-204ENST00000485901 ERVV-1B6SEH8 477 aa15.56■□□□□ 0.08
HLA-DOA-204ENST00000485901 FZD9O00144 591 aa15.56■□□□□ 0.08
HLA-DOA-204ENST00000485901 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
HLA-DOA-204ENST00000485901 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms