RNA–Protein interactions for RNA: ENST00000484313.3

ZEB2-222, Transcript of zinc finger E-box binding homeobox 2, human

TSL 1 (best)

Gene ZEB2, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-222	ENST00000484313	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	FECH	P22830	423 aa		11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	SSFA2	P28290	1259 aa		11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	SIK1	P57059	783 aa		11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	DDRGK1	Q96HY6	314 aa		11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	POLK	Q9UBT6	870 aa		11.54	□□□□□ -0.56
ZEB2-222	ENST00000484313	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.53	□□□□□ -0.56
ZEB2-222	ENST00000484313	PHKG2	P15735	406 aa		11.53	□□□□□ -0.56
ZEB2-222	ENST00000484313	HMGB2	P26583	209 aa	Known RBP	11.53	□□□□□ -0.56
ZEB2-222	ENST00000484313	SMIM5	Q71RC9	77 aa		11.53	□□□□□ -0.56
ZEB2-222	ENST00000484313	ZMYND15	Q9H091	742 aa		11.53	□□□□□ -0.56
ZEB2-222	ENST00000484313	MRC1	P22897	1456 aa		11.52	□□□□□ -0.56
ZEB2-222	ENST00000484313	SEC24B	O95487	1268 aa		11.52	□□□□□ -0.57
ZEB2-222	ENST00000484313	PARP9	Q8IXQ6	854 aa		11.52	□□□□□ -0.57
ZEB2-222	ENST00000484313	SLC4A9	Q96Q91	983 aa		11.52	□□□□□ -0.57
ZEB2-222	ENST00000484313	ASAP1	Q9ULH1	1129 aa		11.52	□□□□□ -0.57
ZEB2-222	ENST00000484313	COLQ	Q9Y215	455 aa	Predicted RBP	11.52	□□□□□ -0.57
ZEB2-222	ENST00000484313	PTGDR	Q13258	359 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	EIF4A2	Q14240	407 aa	Known RBP	11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	PELP1	Q8IZL8	1130 aa	Known RBP	11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	ATG3	Q9NT62	314 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	SPG7	Q9UQ90	795 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	CLSPN	Q9HAW4	1339 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	UBR2	Q8IWV8	1755 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	DLEC1	Q9Y238	1755 aa		11.51	□□□□□ -0.57
ZEB2-222	ENST00000484313	NRXN2	Q9P2S2	1712 aa		11.5	□□□□□ -0.57
ZEB2-222	ENST00000484313	PTCD2	Q8WV60	388 aa	Known RBP	11.5	□□□□□ -0.57
ZEB2-222	ENST00000484313	POTEI	P0CG38	1075 aa		11.49	□□□□□ -0.57
ZEB2-222	ENST00000484313	IFNL2	Q8IZJ0	200 aa		11.49	□□□□□ -0.57
ZEB2-222	ENST00000484313	TMOD3	Q9NYL9	352 aa		11.49	□□□□□ -0.57
ZEB2-222	ENST00000484313	CNTNAP4	Q9C0A0	1308 aa		11.49	□□□□□ -0.57
ZEB2-222	ENST00000484313	PHF14	O94880	888 aa		11.48	□□□□□ -0.57
ZEB2-222	ENST00000484313	TRIM26	Q12899	539 aa	Predicted RBP	11.48	□□□□□ -0.57
ZEB2-222	ENST00000484313	SBF1	O95248	1867 aa		11.47	□□□□□ -0.57
ZEB2-222	ENST00000484313	AFDN	P55196	1824 aa	Known RBP	11.47	□□□□□ -0.57
ZEB2-222	ENST00000484313	SIPA1L3	O60292	1781 aa	Predicted RBP	11.46	□□□□□ -0.57
ZEB2-222	ENST00000484313	KCP	Q6ZWJ8	1503 aa		11.46	□□□□□ -0.57
ZEB2-222	ENST00000484313	ERVV-2	B6SEH9	535 aa		11.46	□□□□□ -0.57
ZEB2-222	ENST00000484313	PPM1G	O15355	546 aa	Predicted RBP	11.45	□□□□□ -0.58
ZEB2-222	ENST00000484313	SLC34A2	O95436	690 aa		11.45	□□□□□ -0.58
ZEB2-222	ENST00000484313	MMP10	P09238	476 aa		11.45	□□□□□ -0.58
ZEB2-222	ENST00000484313	ATP6V1A	P38606	617 aa		11.45	□□□□□ -0.58
ZEB2-222	ENST00000484313	RC3H1	Q5TC82	1133 aa	Known RBP	11.45	□□□□□ -0.58
ZEB2-222	ENST00000484313	WDR90	Q96KV7	1748 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	GYS1	P13807	737 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	AEBP1	Q8IUX7	1158 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	SLC39A7	Q92504	469 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	DCAF5	Q96JK2	942 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	DCBLD2	Q96PD2	775 aa		11.44	□□□□□ -0.58
ZEB2-222	ENST00000484313	SCN7A	Q01118	1682 aa		11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	POTEF	A5A3E0	1075 aa		11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	HSPA6	P17066	643 aa		11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	TTLL12	Q14166	644 aa	Predicted RBP	11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	RSPH6A	Q9H0K4	717 aa		11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	GOPC	Q9HD26	462 aa		11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	COL3A1	P02461	1466 aa	Predicted RBP	11.43	□□□□□ -0.58
ZEB2-222	ENST00000484313	RPS6KA4	O75676	772 aa		11.42	□□□□□ -0.58
ZEB2-222	ENST00000484313	HSP90AB1	P08238	724 aa	Known RBP	11.42	□□□□□ -0.58
ZEB2-222	ENST00000484313	TGFB2	P61812	414 aa		11.42	□□□□□ -0.58
ZEB2-222	ENST00000484313	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.42	□□□□□ -0.58
ZEB2-222	ENST00000484313	ANKRD31	Q8N7Z5	1873 aa		11.42	□□□□□ -0.58
ZEB2-222	ENST00000484313	TIAM2	Q8IVF5	1701 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	C7	P10643	843 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	KCNA3	P22001	575 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	EPAS1	Q99814	870 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	PANK3	Q9H999	370 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	WWC3	Q9ULE0	1092 aa		11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	RTCB	Q9Y3I0	505 aa	Known RBP	11.41	□□□□□ -0.58
ZEB2-222	ENST00000484313	COL11A2	P13942	1736 aa	Predicted RBP	11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	USP42	Q9H9J4	1324 aa	Known RBP	11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	HSPA5	P11021	654 aa	Known RBP	11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	IL13	P35225	146 aa		11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	TNNT2	P45379	298 aa	Predicted RBP	11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	DDR1	Q08345	913 aa		11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	AMOT	Q4VCS5	1084 aa		11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	NLGN1	Q8N2Q7	840 aa		11.4	□□□□□ -0.58
ZEB2-222	ENST00000484313	BCOR	Q6W2J9	1755 aa		11.39	□□□□□ -0.59
ZEB2-222	ENST00000484313	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.39	□□□□□ -0.59
ZEB2-222	ENST00000484313	TRAPPC3L	Q5T215	181 aa		11.39	□□□□□ -0.59
ZEB2-222	ENST00000484313	IFFO2	Q5TF58	517 aa		11.39	□□□□□ -0.59
ZEB2-222	ENST00000484313	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.39	□□□□□ -0.59
ZEB2-222	ENST00000484313	MS4A1	P11836	297 aa		11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	DPEP1	P16444	411 aa		11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	CRKL	P46109	303 aa	Known RBP	11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	1e-18	■■■■□ 23.9
ZEB2-222	ENST00000484313	INTS5	Q6P9B9	1019 aa	Known RBP	11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	C3orf67	Q6ZVT6	689 aa		11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	ZNF526	Q8TF50	670 aa	Predicted RBP	11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	REPIN1	Q9BWE0	567 aa	Known RBP	11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	CDHR5	Q9HBB8	845 aa		11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	ARFGEF2	Q9Y6D5	1785 aa		11.38	□□□□□ -0.59
ZEB2-222	ENST00000484313	SOS1	Q07889	1333 aa	Predicted RBP	11.37	□□□□□ -0.59
ZEB2-222	ENST00000484313		A0A0G2JLW4	131 aa		11.37	□□□□□ -0.59
ZEB2-222	ENST00000484313	CCDC87	Q9NVE4	849 aa		11.37	□□□□□ -0.59
ZEB2-222	ENST00000484313	SRP68	Q9UHB9	627 aa	Known RBP	11.37	□□□□□ -0.59
ZEB2-222	ENST00000484313	DICER1	Q9UPY3	1922 aa	Known RBP	11.37	□□□□□ -0.59
ZEB2-222	ENST00000484313	CCDC88A	Q3V6T2	1871 aa		11.36	□□□□□ -0.59
ZEB2-222	ENST00000484313	CABP4	P57796	275 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms