RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-207ENST00000483969 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
COL8A1-207ENST00000483969 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
COL8A1-207ENST00000483969 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
COL8A1-207ENST00000483969 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
COL8A1-207ENST00000483969 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
COL8A1-207ENST00000483969 USP21Q9UK80 565 aa12.32□□□□□ -0.44
COL8A1-207ENST00000483969 C11orf95C9JLR9 678 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-207ENST00000483969 GCP02774 474 aa12.31□□□□□ -0.44
COL8A1-207ENST00000483969 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-207ENST00000483969 SKOR1P84550 965 aa12.31□□□□□ -0.44
COL8A1-207ENST00000483969 AMHR2Q16671 573 aa12.31□□□□□ -0.44
COL8A1-207ENST00000483969 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
COL8A1-207ENST00000483969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL8A1-207ENST00000483969 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
COL8A1-207ENST00000483969 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
COL8A1-207ENST00000483969 J3QL48 77 aa12.3□□□□□ -0.44
COL8A1-207ENST00000483969 RXRBP28702 533 aa12.3□□□□□ -0.44
COL8A1-207ENST00000483969 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
COL8A1-207ENST00000483969 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-207ENST00000483969 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
COL8A1-207ENST00000483969 ZMYND10O75800 440 aa12.29□□□□□ -0.44
COL8A1-207ENST00000483969 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-207ENST00000483969 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
COL8A1-207ENST00000483969 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
COL8A1-207ENST00000483969 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
COL8A1-207ENST00000483969 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
COL8A1-207ENST00000483969 MS4A1P11836 297 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 SPIRE2Q8WWL2 714 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 ATP13A2Q9NQ11 1180 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 PCDHGC3Q9UN70 934 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
COL8A1-207ENST00000483969 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
COL8A1-207ENST00000483969 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.44
COL8A1-207ENST00000483969 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.45
COL8A1-207ENST00000483969 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.45
COL8A1-207ENST00000483969 USP19O94966 1318 aa12.27□□□□□ -0.45
COL8A1-207ENST00000483969 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
COL8A1-207ENST00000483969 ANKRD36BQ8N2N9 1353 aa12.27□□□□□ -0.45
COL8A1-207ENST00000483969 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
COL8A1-207ENST00000483969 EVA1CP58658 441 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 PTPRNQ16849 979 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 NME9Q86XW9 330 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
COL8A1-207ENST00000483969 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
COL8A1-207ENST00000483969 COG3Q96JB2 828 aa12.25□□□□□ -0.45
COL8A1-207ENST00000483969 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
COL8A1-207ENST00000483969 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
COL8A1-207ENST00000483969 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 SPDYE5A6NIY4 337 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 VPS72Q15906 364 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 LCE2AQ5TA79 106 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-207ENST00000483969 EHBP1Q8NDI1 1231 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
COL8A1-207ENST00000483969 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 HPS1Q92902 700 aa12.24□□□□□ -0.45
COL8A1-207ENST00000483969 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-207ENST00000483969 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
COL8A1-207ENST00000483969 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
COL8A1-207ENST00000483969 CPDO75976 1380 aa12.23□□□□□ -0.45
COL8A1-207ENST00000483969 FYB1O15117 783 aa12.23□□□□□ -0.45
COL8A1-207ENST00000483969 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
COL8A1-207ENST00000483969 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
COL8A1-207ENST00000483969 PANK3Q9H999 370 aa12.23□□□□□ -0.45
COL8A1-207ENST00000483969 BCL9LQ86UU0 1499 aa12.22□□□□□ -0.45
COL8A1-207ENST00000483969 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
COL8A1-207ENST00000483969 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
COL8A1-207ENST00000483969 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
COL8A1-207ENST00000483969 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-207ENST00000483969 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
COL8A1-207ENST00000483969 SLIT2O94813 1529 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 NDUFV2P19404 249 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 GJA5P36382 358 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 MTMR2Q13614 643 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 DESI1Q6ICB0 168 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
COL8A1-207ENST00000483969 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 WFS1O76024 890 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 PRR7Q8TB68 274 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 ATRNO75882 1429 aa12.2□□□□□ -0.46
COL8A1-207ENST00000483969 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
COL8A1-207ENST00000483969 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
COL8A1-207ENST00000483969 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
COL8A1-207ENST00000483969 SOCS7O14512 581 aa12.18□□□□□ -0.46
COL8A1-207ENST00000483969 SIAH2O43255 324 aa12.18□□□□□ -0.46
COL8A1-207ENST00000483969 SH3BP2P78314 561 aa12.18□□□□□ -0.46
COL8A1-207ENST00000483969 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
COL8A1-207ENST00000483969 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
COL8A1-207ENST00000483969 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
COL8A1-207ENST00000483969 SLIT3O75094 1523 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms