RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 ATRNO75882 1429 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 VPS72Q15906 364 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 TSHZ3Q63HK5 1081 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 DISP2A7MBM2 1401 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 SRGAP3O43295 1099 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 POLA2Q14181 598 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 LINS1Q8NG48 757 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 PIGBQ92521 554 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 IBTKQ9P2D0 1353 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-204ENST00000483763 ALDH1L1O75891 902 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 A1BGP04217 495 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 TTC22Q5TAA0 569 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■□□□□ 9.6
CDC42SE1-204ENST00000483763 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 KCPQ6ZWJ8 1503 aa10.96□□□□□ -0.65
CDC42SE1-204ENST00000483763 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.66
CDC42SE1-204ENST00000483763 TOGARAM1Q9Y4F4 1720 aa10.96□□□□□ -0.66
CDC42SE1-204ENST00000483763 GRM8O00222 908 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 JARID2Q92833 1246 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 SALL3Q9BXA9 1300 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 LRRCC1Q9C099 1032 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 BRWD3Q6RI45 1802 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 NEURL1BA8MQ27 555 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 SURF6O75683 361 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 PDE1AP54750 535 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 MYD88Q99836 296 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 TMOD3Q9NYL9 352 aa10.95□□□□□ -0.66
CDC42SE1-204ENST00000483763 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 UTYO14607 1347 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 EXOC5O00471 708 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 SDSP20132 328 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 SUCLG2Q96I99 432 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 C22orf23Q9BZE7 217 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 NRAPQ86VF7 1730 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 GCKRQ14397 625 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
CDC42SE1-204ENST00000483763 SPATA31A1Q5TZJ5 1347 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 MTX1Q13505 466 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 EPHA10Q5JZY3 1008 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 BICC1Q9H694 974 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 PA2G4Q9UQ80 394 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 UBR2Q8IWV8 1755 aa10.93□□□□□ -0.66
CDC42SE1-204ENST00000483763 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 DEFB132Q7Z7B7 95 aa10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
CDC42SE1-204ENST00000483763 NEXNQ0ZGT2 675 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 DNAJC10Q8IXB1 793 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 PLBD2Q8NHP8 589 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 THRAP3Q9Y2W1 955 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 KAT6BQ8WYB5 2073 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 CDC45O75419 566 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 MX1P20591 662 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 DDB1Q16531 1140 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 KRT27Q7Z3Y8 459 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 KLHDC4Q8TBB5 520 aa10.91□□□□□ -0.66
CDC42SE1-204ENST00000483763 BCL9O00512 1426 aa10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 ZBTB3Q9H5J0 574 aa10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 KIF2CQ99661 725 aa10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-204ENST00000483763 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 ONECUT3O60422 494 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 RAB11FIP3O75154 756 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 UBE3BQ7Z3V4 1068 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 STAP2Q9UGK3 403 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 WNK3Q9BYP7 1800 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 A0A087WZG4 1122 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 CASP7P55210 303 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 MARCH10Q8NA82 808 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 TBC1D2Q9BYX2 928 aa10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-204ENST00000483763 TRIM37O94972 964 aa10.88□□□□□ -0.67
CDC42SE1-204ENST00000483763 ITGB4P16144 1822 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms