RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
TMEM54-206ENST00000482771 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
TMEM54-206ENST00000482771 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
TMEM54-206ENST00000482771 DLEC1Q9Y238 1755 aa17.22■□□□□ 0.35
TMEM54-206ENST00000482771 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
TMEM54-206ENST00000482771 PRAMEF22A3QJZ6 481 aa17.2■□□□□ 0.34
TMEM54-206ENST00000482771 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
TMEM54-206ENST00000482771 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
TMEM54-206ENST00000482771 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
TMEM54-206ENST00000482771 IQCA1LA6NCM1 817 aa17.19■□□□□ 0.34
TMEM54-206ENST00000482771 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TMEM54-206ENST00000482771 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
TMEM54-206ENST00000482771 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 SNRPA1P09661 255 aaKnown RBP17.18■□□□□ 0.34
TMEM54-206ENST00000482771 NPR1P16066 1061 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 TPTE2Q6XPS3 522 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 LDHDQ86WU2 507 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
TMEM54-206ENST00000482771 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
TMEM54-206ENST00000482771 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
TMEM54-206ENST00000482771 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
TMEM54-206ENST00000482771 EAPPQ56P03 285 aaPredicted RBP17.17■□□□□ 0.34
TMEM54-206ENST00000482771 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
TMEM54-206ENST00000482771 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
TMEM54-206ENST00000482771 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
TMEM54-206ENST00000482771 KLRG2A4D1S0 409 aaPredicted RBP17.16■□□□□ 0.34
TMEM54-206ENST00000482771 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM54-206ENST00000482771 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
TMEM54-206ENST00000482771 MCM10Q7L590 875 aa17.16■□□□□ 0.34
TMEM54-206ENST00000482771 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
TMEM54-206ENST00000482771 L3MBTL3Q96JM7 780 aaPredicted RBP17.16■□□□□ 0.34
TMEM54-206ENST00000482771 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
TMEM54-206ENST00000482771 NIP7Q9Y221 180 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM54-206ENST00000482771 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
TMEM54-206ENST00000482771 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
TMEM54-206ENST00000482771 NBPF26B4DH59 902 aa17.15■□□□□ 0.34
TMEM54-206ENST00000482771 FOXN1O15353 648 aa17.15■□□□□ 0.34
TMEM54-206ENST00000482771 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
TMEM54-206ENST00000482771 NBPF10Q6P3W6 841 aaKnown RBP17.15■□□□□ 0.34
TMEM54-206ENST00000482771 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
TMEM54-206ENST00000482771 NBPF15Q8N660 670 aa17.15■□□□□ 0.34
TMEM54-206ENST00000482771 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
TMEM54-206ENST00000482771 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
TMEM54-206ENST00000482771 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 VEGFBP49765 207 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 HACL1Q9UJ83 578 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 CNTNAP1P78357 1384 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
TMEM54-206ENST00000482771 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
TMEM54-206ENST00000482771 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
TMEM54-206ENST00000482771 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
TMEM54-206ENST00000482771 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
TMEM54-206ENST00000482771 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
TMEM54-206ENST00000482771 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
TMEM54-206ENST00000482771 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
TMEM54-206ENST00000482771 EPHX2P34913 555 aa17.12■□□□□ 0.33
TMEM54-206ENST00000482771 HLFQ16534 295 aa17.12■□□□□ 0.33
TMEM54-206ENST00000482771 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
TMEM54-206ENST00000482771 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
TMEM54-206ENST00000482771 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
TMEM54-206ENST00000482771 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
TMEM54-206ENST00000482771 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
TMEM54-206ENST00000482771 FZD9O00144 591 aa17.1■□□□□ 0.33
TMEM54-206ENST00000482771 RGL2O15211 777 aa17.1■□□□□ 0.33
TMEM54-206ENST00000482771 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
TMEM54-206ENST00000482771 CTCFP49711 727 aaPredicted RBP17.1■□□□□ 0.33
TMEM54-206ENST00000482771 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
TMEM54-206ENST00000482771 MAP1SQ66K74 1059 aaPredicted RBP17.1■□□□□ 0.33
TMEM54-206ENST00000482771 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
TMEM54-206ENST00000482771 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
TMEM54-206ENST00000482771 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
TMEM54-206ENST00000482771 DEFB115Q30KQ5 88 aa17.09■□□□□ 0.33
TMEM54-206ENST00000482771 JDP2Q8WYK2 163 aa17.09■□□□□ 0.33
TMEM54-206ENST00000482771 WBP1LQ9NX94 342 aa17.09■□□□□ 0.33
TMEM54-206ENST00000482771 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
TMEM54-206ENST00000482771 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
TMEM54-206ENST00000482771 LBX1P52954 281 aa17.08■□□□□ 0.32
TMEM54-206ENST00000482771 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
TMEM54-206ENST00000482771 GPC2Q8N158 579 aa17.07■□□□□ 0.32
TMEM54-206ENST00000482771 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
TMEM54-206ENST00000482771 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
TMEM54-206ENST00000482771 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
TMEM54-206ENST00000482771 PSMD1Q99460 953 aa17.06■□□□□ 0.32
TMEM54-206ENST00000482771 SCN4AP35499 1836 aa17.05■□□□□ 0.32
TMEM54-206ENST00000482771 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
TMEM54-206ENST00000482771 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
TMEM54-206ENST00000482771 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
TMEM54-206ENST00000482771 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
TMEM54-206ENST00000482771 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
TMEM54-206ENST00000482771 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
TMEM54-206ENST00000482771 CRY2Q49AN0 593 aa17.04■□□□□ 0.32
TMEM54-206ENST00000482771 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
TMEM54-206ENST00000482771 WDR33Q9C0J8 1336 aaKnown RBP17.03■□□□□ 0.32
TMEM54-206ENST00000482771 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
TMEM54-206ENST00000482771 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
TMEM54-206ENST00000482771 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms