RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
APTX-225ENST00000482687 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
APTX-225ENST00000482687 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
APTX-225ENST00000482687 USP44Q9H0E7 712 aa12.92□□□□□ -0.34
APTX-225ENST00000482687 ZNF330Q9Y3S2 320 aaPredicted RBP12.92□□□□□ -0.34
APTX-225ENST00000482687 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
APTX-225ENST00000482687 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
APTX-225ENST00000482687 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
APTX-225ENST00000482687 THSD7AQ9UPZ6 1657 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 TJP1Q07157 1748 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 GNAI2P04899 355 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 PTF1AQ7RTS3 328 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 MYD88Q99836 296 aa12.91□□□□□ -0.34
APTX-225ENST00000482687 GNAI3P08754 354 aa12.9□□□□□ -0.34
APTX-225ENST00000482687 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
APTX-225ENST00000482687 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
APTX-225ENST00000482687 ATRNO75882 1429 aa12.9□□□□□ -0.34
APTX-225ENST00000482687 APBB1O00213 710 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
APTX-225ENST00000482687 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
APTX-225ENST00000482687 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
APTX-225ENST00000482687 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
APTX-225ENST00000482687 IGKV5-2P06315 115 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 ARXQ96QS3 562 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
APTX-225ENST00000482687 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
APTX-225ENST00000482687 ATP5J2-PTCD1G3V325 749 aa12.88□□□□□ -0.35
APTX-225ENST00000482687 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
APTX-225ENST00000482687 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
APTX-225ENST00000482687 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
APTX-225ENST00000482687 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
APTX-225ENST00000482687 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
APTX-225ENST00000482687 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 STARD3NLO95772 234 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 TPM2P07951 284 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
APTX-225ENST00000482687 NUCB1Q02818 461 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
APTX-225ENST00000482687 TEX13AQ9BXU3 409 aaPredicted RBP12.87□□□□□ -0.35
APTX-225ENST00000482687 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 KCNQ4P56696 695 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 BTAF1O14981 1849 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 BRWD3Q6RI45 1802 aa12.86□□□□□ -0.35
APTX-225ENST00000482687 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
APTX-225ENST00000482687 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 SIK1P57059 783 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 ITPK1Q13572 414 aa12.85□□□□□ -0.35
APTX-225ENST00000482687 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 GRM8O00222 908 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
APTX-225ENST00000482687 HMMRO75330 724 aa12.83□□□□□ -0.36
APTX-225ENST00000482687 GCKRQ14397 625 aa12.83□□□□□ -0.36
APTX-225ENST00000482687 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
APTX-225ENST00000482687 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
APTX-225ENST00000482687 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
APTX-225ENST00000482687 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
APTX-225ENST00000482687 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
APTX-225ENST00000482687 KIF6Q6ZMV9 814 aa12.82□□□□□ -0.36
APTX-225ENST00000482687 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
APTX-225ENST00000482687 HLFQ16534 295 aa12.81□□□□□ -0.36
APTX-225ENST00000482687 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
APTX-225ENST00000482687 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
APTX-225ENST00000482687 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
APTX-225ENST00000482687 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
APTX-225ENST00000482687 A0A087WZG4 1122 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
APTX-225ENST00000482687 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
APTX-225ENST00000482687 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
APTX-225ENST00000482687 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
APTX-225ENST00000482687 UTYO14607 1347 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 NUP98P52948 1817 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
APTX-225ENST00000482687 BECN1Q14457 450 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
APTX-225ENST00000482687 CCDC87Q9NVE4 849 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms