RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 A0A087WZG4 1122 aa13.91□□□□□ -0.18
DDX39B-220ENST00000482195 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
DDX39B-220ENST00000482195 STARD3NLO95772 234 aa13.91□□□□□ -0.18
DDX39B-220ENST00000482195 TEFQ10587 303 aa13.91□□□□□ -0.18
DDX39B-220ENST00000482195 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
DDX39B-220ENST00000482195 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
DDX39B-220ENST00000482195 GSE1Q14687 1217 aa13.9□□□□□ -0.18
DDX39B-220ENST00000482195 NPM2Q86SE8 214 aaKnown RBP13.9□□□□□ -0.18
DDX39B-220ENST00000482195 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
DDX39B-220ENST00000482195 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
DDX39B-220ENST00000482195 CCDC24Q8N4L8 307 aa13.89□□□□□ -0.19
DDX39B-220ENST00000482195 PCNTO95613 3336 aa13.89□□□□□ -0.19
DDX39B-220ENST00000482195 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
DDX39B-220ENST00000482195 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
DDX39B-220ENST00000482195 NFKBIEO00221 500 aa13.88□□□□□ -0.19
DDX39B-220ENST00000482195 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
DDX39B-220ENST00000482195 PRELPP51888 382 aa13.88□□□□□ -0.19
DDX39B-220ENST00000482195 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
DDX39B-220ENST00000482195 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
DDX39B-220ENST00000482195 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 C21orf2O43822 256 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 PDE6BP35913 854 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
DDX39B-220ENST00000482195 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
DDX39B-220ENST00000482195 SLX4Q8IY92 1834 aa13.87□□□□□ -0.19
DDX39B-220ENST00000482195 COL13A1Q5TAT6 717 aaPredicted RBP13.86□□□□□ -0.19
DDX39B-220ENST00000482195 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
DDX39B-220ENST00000482195 RNF25Q96BH1 459 aaPredicted RBP13.86□□□□□ -0.19
DDX39B-220ENST00000482195 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
DDX39B-220ENST00000482195 ST5P78524 1137 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 CNBD1Q8NA66 436 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 FMNL2Q96PY5 1086 aa13.85□□□□□ -0.19
DDX39B-220ENST00000482195 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
DDX39B-220ENST00000482195 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
DDX39B-220ENST00000482195 SETDB2Q96T68 719 aa13.84□□□□□ -0.19
DDX39B-220ENST00000482195 BRIP1Q9BX63 1249 aa13.84□□□□□ -0.19
DDX39B-220ENST00000482195 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
DDX39B-220ENST00000482195 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
DDX39B-220ENST00000482195 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
DDX39B-220ENST00000482195 A1BGP04217 495 aa13.83□□□□□ -0.2
DDX39B-220ENST00000482195 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-220ENST00000482195 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-220ENST00000482195 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-220ENST00000482195 HS6ST3Q8IZP7 471 aa13.83□□□□□ -0.2
DDX39B-220ENST00000482195 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
DDX39B-220ENST00000482195 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
DDX39B-220ENST00000482195 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
DDX39B-220ENST00000482195 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
DDX39B-220ENST00000482195 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
DDX39B-220ENST00000482195 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
DDX39B-220ENST00000482195 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
DDX39B-220ENST00000482195 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
DDX39B-220ENST00000482195 KCNQ3O43525 872 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
DDX39B-220ENST00000482195 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
DDX39B-220ENST00000482195 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-220ENST00000482195 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
DDX39B-220ENST00000482195 SCN4AP35499 1836 aa13.8□□□□□ -0.2
DDX39B-220ENST00000482195 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
DDX39B-220ENST00000482195 POTECB2RU33 542 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 SOGA3Q5TF21 947 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 STYK1Q6J9G0 422 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
DDX39B-220ENST00000482195 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
DDX39B-220ENST00000482195 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
DDX39B-220ENST00000482195 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-220ENST00000482195 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
DDX39B-220ENST00000482195 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
DDX39B-220ENST00000482195 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
DDX39B-220ENST00000482195 LTBP3Q9NS15 1303 aa13.78□□□□□ -0.2
DDX39B-220ENST00000482195 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 SRGNP10124 158 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 DLG5Q8TDM6 1919 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 NUDCQ9Y266 331 aa13.77□□□□□ -0.21
DDX39B-220ENST00000482195 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-220ENST00000482195 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.217e-15■■■□□ 14.8
DDX39B-220ENST00000482195 MCM10Q7L590 875 aa13.76□□□□□ -0.21
DDX39B-220ENST00000482195 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
DDX39B-220ENST00000482195 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
DDX39B-220ENST00000482195 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
DDX39B-220ENST00000482195 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-220ENST00000482195 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-220ENST00000482195 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.215e-52■■□□□ 13.4
DDX39B-220ENST00000482195 NUP98P52948 1817 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 225.5 ms