RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 NBPF26B4DH59 902 aa25.68■■□□□ 1.7
CHPF2-203ENST00000482173 NBPF10Q6P3W6 841 aaKnown RBP25.68■■□□□ 1.7
CHPF2-203ENST00000482173 NBPF15Q8N660 670 aa25.68■■□□□ 1.7
CHPF2-203ENST00000482173 CNKSR1Q969H4 720 aa25.68■■□□□ 1.7
CHPF2-203ENST00000482173 COL11A2P13942 1736 aaPredicted RBP25.67■■□□□ 1.7
CHPF2-203ENST00000482173 NBPF5PQ86XG9 351 aaPredicted RBP25.67■■□□□ 1.7
CHPF2-203ENST00000482173 SRGNP10124 158 aa25.66■■□□□ 1.7
CHPF2-203ENST00000482173 VEGFAP15692 232 aaPredicted RBP25.66■■□□□ 1.7
CHPF2-203ENST00000482173 STYK1Q6J9G0 422 aa25.66■■□□□ 1.7
CHPF2-203ENST00000482173 MASTLQ96GX5 879 aa25.64■■□□□ 1.7
CHPF2-203ENST00000482173 NIP7Q9Y221 180 aaKnown RBP eCLIP25.64■■□□□ 1.7
CHPF2-203ENST00000482173 HTRA3P83110 453 aa25.63■■□□□ 1.69
CHPF2-203ENST00000482173 PRPF40BQ6NWY9 871 aaKnown RBP25.63■■□□□ 1.69
CHPF2-203ENST00000482173 SMC1BQ8NDV3 1235 aa25.63■■□□□ 1.69
CHPF2-203ENST00000482173 PLEKHF1Q96S99 279 aa25.63■■□□□ 1.69
CHPF2-203ENST00000482173 TIAM2Q8IVF5 1701 aa25.63■■□□□ 1.69
CHPF2-203ENST00000482173 FER1L6Q2WGJ9 1857 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 ERFEQ4G0M1 354 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 IFFO2Q5TF58 517 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 DPY19L2Q6NUT2 758 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 TPTE2Q6XPS3 522 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 PNISRQ8TF01 805 aaKnown RBP25.62■■□□□ 1.69
CHPF2-203ENST00000482173 DLG5Q8TDM6 1919 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 SLX4Q8IY92 1834 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 WDR90Q96KV7 1748 aa25.62■■□□□ 1.69
CHPF2-203ENST00000482173 RGL2O15211 777 aa25.61■■□□□ 1.69
CHPF2-203ENST00000482173 NFE2L2Q16236 605 aa25.61■■□□□ 1.69
CHPF2-203ENST00000482173 TAOK3Q9H2K8 898 aa25.61■■□□□ 1.69
CHPF2-203ENST00000482173 FAM177BA6PVY3 158 aa25.6■■□□□ 1.69
CHPF2-203ENST00000482173 HLFQ16534 295 aa25.6■■□□□ 1.69
CHPF2-203ENST00000482173 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
CHPF2-203ENST00000482173 PNNQ9H307 717 aaKnown RBP25.6■■□□□ 1.69
CHPF2-203ENST00000482173 LTBP3Q9NS15 1303 aa25.6■■□□□ 1.69
CHPF2-203ENST00000482173 CACNA1SQ13698 1873 aa25.6■■□□□ 1.69
CHPF2-203ENST00000482173 NGEFQ8N5V2 710 aa25.59■■□□□ 1.69
CHPF2-203ENST00000482173 THUMPD2Q9BTF0 503 aaKnown RBP25.59■■□□□ 1.69
CHPF2-203ENST00000482173 NPR1P16066 1061 aa25.58■■□□□ 1.69
CHPF2-203ENST00000482173 DICER1Q9UPY3 1922 aaKnown RBP25.58■■□□□ 1.69
CHPF2-203ENST00000482173 MAPK8IP3Q9UPT6 1336 aa25.58■■□□□ 1.69
CHPF2-203ENST00000482173 POTECB2RU33 542 aa25.57■■□□□ 1.68
CHPF2-203ENST00000482173 EIF4A1P60842 406 aaKnown RBP25.57■■□□□ 1.68
CHPF2-203ENST00000482173 KLRG2A4D1S0 409 aaPredicted RBP25.56■■□□□ 1.68
CHPF2-203ENST00000482173 KLRG1Q96E93 195 aa25.56■■□□□ 1.68
CHPF2-203ENST00000482173 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
CHPF2-203ENST00000482173 LAMB4A4D0S4 1761 aa25.55■■□□□ 1.68
CHPF2-203ENST00000482173 KDM3BQ7LBC6 1761 aa25.55■■□□□ 1.68
CHPF2-203ENST00000482173 ARFGEF2Q9Y6D5 1785 aa25.55■■□□□ 1.68
CHPF2-203ENST00000482173 GTF2E1P29083 439 aaPredicted RBP25.55■■□□□ 1.68
CHPF2-203ENST00000482173 C7orf43Q8WVR3 580 aa25.55■■□□□ 1.68
CHPF2-203ENST00000482173 ERVV-1B6SEH8 477 aa25.53■■□□□ 1.68
CHPF2-203ENST00000482173 CCDC93Q567U6 631 aa25.53■■□□□ 1.68
CHPF2-203ENST00000482173 MYL6BP14649 208 aa25.52■■□□□ 1.68
CHPF2-203ENST00000482173 DDNO94850 711 aaPredicted RBP25.51■■□□□ 1.67
CHPF2-203ENST00000482173 KIF6Q6ZMV9 814 aa25.51■■□□□ 1.67
CHPF2-203ENST00000482173 TTLL7Q6ZT98 887 aa25.51■■□□□ 1.67
CHPF2-203ENST00000482173 MAP3K15Q6ZN16 1313 aa25.51■■□□□ 1.67
CHPF2-203ENST00000482173 RALBP1Q15311 655 aa25.5■■□□□ 1.67
CHPF2-203ENST00000482173 NYXQ9GZU5 481 aa25.5■■□□□ 1.67
CHPF2-203ENST00000482173 ALDH1B1P30837 517 aa25.49■■□□□ 1.67
CHPF2-203ENST00000482173 JMYQ8N9B5 988 aa25.49■■□□□ 1.67
CHPF2-203ENST00000482173 RIPK4P57078 832 aa25.48■■□□□ 1.67
CHPF2-203ENST00000482173 FKBP4Q02790 459 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHPF2-203ENST00000482173 OLFM4Q6UX06 510 aa25.48■■□□□ 1.67
CHPF2-203ENST00000482173 NUTM1Q86Y26 1132 aa25.48■■□□□ 1.67
CHPF2-203ENST00000482173 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
CHPF2-203ENST00000482173 NUP98P52948 1817 aa25.48■■□□□ 1.67
CHPF2-203ENST00000482173 GPTP24298 496 aa25.47■■□□□ 1.67
CHPF2-203ENST00000482173 RTKN2Q8IZC4 609 aa25.47■■□□□ 1.67
CHPF2-203ENST00000482173 ZBTB3Q9H5J0 574 aa25.47■■□□□ 1.67
CHPF2-203ENST00000482173 ZNF277Q9NRM2 450 aaPredicted RBP25.46■■□□□ 1.67
CHPF2-203ENST00000482173 ABCC12Q96J65 1359 aa25.44■■□□□ 1.66
CHPF2-203ENST00000482173 ERBB4Q15303 1308 aa25.44■■□□□ 1.66
CHPF2-203ENST00000482173 TMPOP42166 694 aaKnown RBP25.43■■□□□ 1.66
CHPF2-203ENST00000482173 CRY2Q49AN0 593 aa25.43■■□□□ 1.66
CHPF2-203ENST00000482173 CHADLQ6NUI6 762 aa25.43■■□□□ 1.66
CHPF2-203ENST00000482173 UBN2Q6ZU65 1347 aa25.42■■□□□ 1.66
CHPF2-203ENST00000482173 EIF2S2P20042 333 aaKnown RBP25.42■■□□□ 1.66
CHPF2-203ENST00000482173 DDX10Q13206 875 aaKnown RBP25.42■■□□□ 1.66
CHPF2-203ENST00000482173 SUSD4Q5VX71 490 aa25.42■■□□□ 1.66
CHPF2-203ENST00000482173 ZNF34Q8IZ26 560 aa25.42■■□□□ 1.66
CHPF2-203ENST00000482173 SYNE4Q8N205 404 aa25.42■■□□□ 1.66
CHPF2-203ENST00000482173 RPGRQ92834 1020 aaKnown RBP25.42■■□□□ 1.66
CHPF2-203ENST00000482173 IQCA1LA6NCM1 817 aa25.41■■□□□ 1.66
CHPF2-203ENST00000482173 POTEIP0CG38 1075 aa25.41■■□□□ 1.66
CHPF2-203ENST00000482173 POTEJP0CG39 1038 aa25.41■■□□□ 1.66
CHPF2-203ENST00000482173 GIGYF2Q6Y7W6 1299 aaKnown RBP25.41■■□□□ 1.66
CHPF2-203ENST00000482173 BABAM1Q9NWV8 329 aa25.41■■□□□ 1.66
CHPF2-203ENST00000482173 IARSP41252 1262 aaKnown RBP25.4■■□□□ 1.66
CHPF2-203ENST00000482173 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
CHPF2-203ENST00000482173 L3MBTL3Q96JM7 780 aaPredicted RBP25.4■■□□□ 1.66
CHPF2-203ENST00000482173 HOXA10P31260 410 aaPredicted RBP25.39■■□□□ 1.66
CHPF2-203ENST00000482173 PDIA6Q15084 440 aa25.39■■□□□ 1.66
CHPF2-203ENST00000482173 IBTKQ9P2D0 1353 aaPredicted RBP25.39■■□□□ 1.65
CHPF2-203ENST00000482173 ZNF541Q9H0D2 1346 aa25.38■■□□□ 1.65
CHPF2-203ENST00000482173 CC2D2BQ6DHV5 1058 aa25.38■■□□□ 1.65
CHPF2-203ENST00000482173 PPP1R42Q7Z4L9 355 aa25.38■■□□□ 1.65
CHPF2-203ENST00000482173 TAF1DQ9H5J8 278 aaPredicted RBP25.38■■□□□ 1.65
CHPF2-203ENST00000482173 NTSR2O95665 410 aa25.37■■□□□ 1.65
CHPF2-203ENST00000482173 ANXA1P04083 346 aa25.37■■□□□ 1.65
CHPF2-203ENST00000482173 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 304.1 ms