RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 SLC4A9Q96Q91 983 aa7.98□□□□□ -1.13
PRKCB-206ENST00000482000 ESYT1Q9BSJ8 1104 aa7.98□□□□□ -1.13
PRKCB-206ENST00000482000 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
PRKCB-206ENST00000482000 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
PRKCB-206ENST00000482000 TRAPPC8Q9Y2L5 1435 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 SPINT1O43278 529 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 MRPL14Q6P1L8 145 aaKnown RBP7.97□□□□□ -1.13
PRKCB-206ENST00000482000 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 HOMEZQ8IX15 550 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 AFAP1Q8N556 730 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 CNKSR1Q969H4 720 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 RBM19Q9Y4C8 960 aaKnown RBP7.97□□□□□ -1.13
PRKCB-206ENST00000482000 MLH3Q9UHC1 1453 aa7.97□□□□□ -1.13
PRKCB-206ENST00000482000 PREX1Q8TCU6 1659 aa7.96□□□□□ -1.13
PRKCB-206ENST00000482000 BACH1O14867 736 aa7.96□□□□□ -1.14
PRKCB-206ENST00000482000 UPP2O95045 317 aa7.96□□□□□ -1.14
PRKCB-206ENST00000482000 USTQ9Y2C2 406 aa7.96□□□□□ -1.14
PRKCB-206ENST00000482000 SETD1BQ9UPS6 1966 aaKnown RBP7.96□□□□□ -1.14
PRKCB-206ENST00000482000 GPATCH8Q9UKJ3 1502 aaKnown RBP7.96□□□□□ -1.14
PRKCB-206ENST00000482000 C3P01024 1663 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 ST8SIA5O15466 376 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 CENPCQ03188 943 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 PDE4CQ08493 712 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 SERTAD1Q9UHV2 236 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
PRKCB-206ENST00000482000 AGLP35573 1532 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 SYCP2Q9BX26 1530 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 CARNS1A5YM72 827 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 MEN1O00255 615 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 BMP2P12643 396 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 BMP1P13497 986 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
PRKCB-206ENST00000482000 SMTNP53814 917 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 EPHA4P54764 986 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 MLECQ14165 292 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 MTFR1Q15390 333 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 SWI5Q1ZZU3 235 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 TSEN2Q8NCE0 465 aaKnown RBP7.94□□□□□ -1.14
PRKCB-206ENST00000482000 NLRP3Q96P20 1036 aa7.94□□□□□ -1.14
PRKCB-206ENST00000482000 INSM2Q96T92 566 aaPredicted RBP7.94□□□□□ -1.14
PRKCB-206ENST00000482000 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
PRKCB-206ENST00000482000 TIAM1Q13009 1591 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 INO80Q9ULG1 1556 aaPredicted RBP7.93□□□□□ -1.14
PRKCB-206ENST00000482000 STRCQ7RTU9 1775 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 GPC1P35052 558 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 SCARF1Q14162 830 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 C6orf118Q5T5N4 469 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 TNS4Q8IZW8 715 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
PRKCB-206ENST00000482000 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 PURBQ96QR8 312 aaKnown RBP7.93□□□□□ -1.14
PRKCB-206ENST00000482000 ATP13A2Q9NQ11 1180 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 SLAIN2Q9P270 581 aa7.93□□□□□ -1.14
PRKCB-206ENST00000482000 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
PRKCB-206ENST00000482000 A6NJY4 79 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 LCE2BO14633 110 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 CTSOP43234 321 aaPredicted RBP7.92□□□□□ -1.14
PRKCB-206ENST00000482000 FOXK2Q01167 660 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 HINFPQ9BQA5 517 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 CEP162Q5TB80 1403 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 EHBP1L1Q8N3D4 1523 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 PLXNC1O60486 1568 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 MROH2AA6NES4 1674 aa7.92□□□□□ -1.14
PRKCB-206ENST00000482000 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
PRKCB-206ENST00000482000 HSPA2P54652 639 aa7.91□□□□□ -1.14
PRKCB-206ENST00000482000 FOXD4L5Q5VV16 416 aaPredicted RBP7.91□□□□□ -1.14
PRKCB-206ENST00000482000 TRAIPQ9BWF2 469 aa7.91□□□□□ -1.14
PRKCB-206ENST00000482000 SCHIP1Q9P0W5 487 aaPredicted RBP7.91□□□□□ -1.14
PRKCB-206ENST00000482000 SOS2Q07890 1332 aaPredicted RBP7.91□□□□□ -1.14
PRKCB-206ENST00000482000 ATP7AQ04656 1500 aa7.91□□□□□ -1.14
PRKCB-206ENST00000482000 KIAA1107Q9UPP5 1409 aa7.9□□□□□ -1.14
PRKCB-206ENST00000482000 WEE1P30291 646 aa7.9□□□□□ -1.14
PRKCB-206ENST00000482000 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
PRKCB-206ENST00000482000 TLR1Q15399 786 aa7.9□□□□□ -1.14
PRKCB-206ENST00000482000 Q6ZNB5 142 aa7.9□□□□□ -1.14
PRKCB-206ENST00000482000 POLMQ9NP87 494 aaPredicted RBP7.9□□□□□ -1.14
PRKCB-206ENST00000482000 IQSEC3Q9UPP2 1182 aaPredicted RBP7.9□□□□□ -1.14
PRKCB-206ENST00000482000 ADGBQ8N7X0 1667 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 PLEKHH2Q8IVE3 1493 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 MTUS2Q5JR59 1369 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 TTLL8A6PVC2 850 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 LGR5O75473 907 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
PRKCB-206ENST00000482000 OCLNQ16625 522 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 PPARGC1BQ86YN6 1023 aaKnown RBP7.89□□□□□ -1.15
PRKCB-206ENST00000482000 ZSCAN10Q96SZ4 725 aaPredicted RBP7.89□□□□□ -1.15
PRKCB-206ENST00000482000 USP3Q9Y6I4 520 aa7.89□□□□□ -1.15
PRKCB-206ENST00000482000 CLTCQ00610 1675 aaKnown RBP7.89□□□□□ -1.15
PRKCB-206ENST00000482000 ATAD2Q6PL18 1390 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 CCNB3Q8WWL7 1395 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 C21orf2O43822 256 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 HNRNPMP52272 730 aaKnown RBP eCLIP7.88□□□□□ -1.15
PRKCB-206ENST00000482000 SLC27A3Q5K4L6 730 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 RNF217Q8TC41 542 aa7.88□□□□□ -1.15
PRKCB-206ENST00000482000 TSPAN10Q9H1Z9 355 aaPredicted RBP7.88□□□□□ -1.15
PRKCB-206ENST00000482000 MBD5Q9P267 1494 aa7.87□□□□□ -1.15
PRKCB-206ENST00000482000 SPATA31C2B4DYI2 1134 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms