RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
HDAC6-224ENST00000481929 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
HDAC6-224ENST00000481929 TBC1D2BQ9UPU7 963 aa20.37■□□□□ 0.85
HDAC6-224ENST00000481929 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
HDAC6-224ENST00000481929 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
HDAC6-224ENST00000481929 WDR33Q9C0J8 1336 aaKnown RBP20.35■□□□□ 0.85
HDAC6-224ENST00000481929 EPHX2P34913 555 aa20.35■□□□□ 0.85
HDAC6-224ENST00000481929 MLLT1Q03111 559 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-224ENST00000481929 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
HDAC6-224ENST00000481929 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-224ENST00000481929 PCDH10Q9P2E7 1040 aa20.35■□□□□ 0.85
HDAC6-224ENST00000481929 ZNF541Q9H0D2 1346 aa20.34■□□□□ 0.85
HDAC6-224ENST00000481929 IL6STP40189 918 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-224ENST00000481929 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
HDAC6-224ENST00000481929 TEX13AQ9BXU3 409 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-224ENST00000481929 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
HDAC6-224ENST00000481929 ADAMTSL1Q8N6G6 1762 aa20.34■□□□□ 0.85
HDAC6-224ENST00000481929 HMOX1P09601 288 aa20.33■□□□□ 0.85
HDAC6-224ENST00000481929 FKBP4Q02790 459 aaKnown RBP eCLIP20.33■□□□□ 0.85
HDAC6-224ENST00000481929 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-224ENST00000481929 CCDC85CA6NKD9 419 aa20.32■□□□□ 0.84
HDAC6-224ENST00000481929 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
HDAC6-224ENST00000481929 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
HDAC6-224ENST00000481929 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-224ENST00000481929 ZNF277Q9NRM2 450 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-224ENST00000481929 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
HDAC6-224ENST00000481929 RNF123Q5XPI4 1314 aa20.31■□□□□ 0.84
HDAC6-224ENST00000481929 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
HDAC6-224ENST00000481929 BEGAINQ9BUH8 593 aa20.31■□□□□ 0.84
HDAC6-224ENST00000481929 NPR1P16066 1061 aa20.29■□□□□ 0.84
HDAC6-224ENST00000481929 RGS19P49795 217 aa20.29■□□□□ 0.84
HDAC6-224ENST00000481929 TEFQ10587 303 aa20.28■□□□□ 0.84
HDAC6-224ENST00000481929 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
HDAC6-224ENST00000481929 PAXIP1Q6ZW49 1069 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-224ENST00000481929 NBPF5PQ86XG9 351 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-224ENST00000481929 ECE1P42892 770 aa20.27■□□□□ 0.84
HDAC6-224ENST00000481929 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
HDAC6-224ENST00000481929 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
HDAC6-224ENST00000481929 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
HDAC6-224ENST00000481929 KNSTRNQ9Y448 316 aa20.27■□□□□ 0.84
HDAC6-224ENST00000481929 THSD7BQ9C0I4 1608 aa20.27■□□□□ 0.83
HDAC6-224ENST00000481929 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 FZD9O00144 591 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 A1BGP04217 495 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 IARSP41252 1262 aaKnown RBP20.26■□□□□ 0.83
HDAC6-224ENST00000481929 GPC2Q8N158 579 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 CAPNS2Q96L46 248 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
HDAC6-224ENST00000481929 GRM1Q13255 1194 aa20.24■□□□□ 0.83
HDAC6-224ENST00000481929 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
HDAC6-224ENST00000481929 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-224ENST00000481929 KLRG2A4D1S0 409 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-224ENST00000481929 CLEC4GQ6UXB4 293 aa20.23■□□□□ 0.83
HDAC6-224ENST00000481929 SYNE4Q8N205 404 aa20.23■□□□□ 0.83
HDAC6-224ENST00000481929 JDP2Q8WYK2 163 aa20.23■□□□□ 0.83
HDAC6-224ENST00000481929 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
HDAC6-224ENST00000481929 ZNF652Q9Y2D9 606 aa20.23■□□□□ 0.83
HDAC6-224ENST00000481929 LMOD1P29536 600 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-224ENST00000481929 CYP4F22Q6NT55 531 aa20.22■□□□□ 0.83
HDAC6-224ENST00000481929 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
HDAC6-224ENST00000481929 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
HDAC6-224ENST00000481929 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
HDAC6-224ENST00000481929 GJA3Q9Y6H8 435 aa20.21■□□□□ 0.83
HDAC6-224ENST00000481929 GNAT3A8MTJ3 354 aa20.2■□□□□ 0.82
HDAC6-224ENST00000481929 ALDH1B1P30837 517 aa20.2■□□□□ 0.82
HDAC6-224ENST00000481929 EIF6P56537 245 aaKnown RBP20.2■□□□□ 0.82
HDAC6-224ENST00000481929 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
HDAC6-224ENST00000481929 TPTE2Q6XPS3 522 aa20.2■□□□□ 0.82
HDAC6-224ENST00000481929 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-224ENST00000481929 FMR1Q06787 632 aaKnown RBP eCLIP20.19■□□□□ 0.82
HDAC6-224ENST00000481929 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
HDAC6-224ENST00000481929 PSMD1Q99460 953 aa20.19■□□□□ 0.82
HDAC6-224ENST00000481929 TSKSQ9UJT2 592 aa20.19■□□□□ 0.82
HDAC6-224ENST00000481929 HSPA5P11021 654 aaKnown RBP20.18■□□□□ 0.82
HDAC6-224ENST00000481929 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-224ENST00000481929 NIP7Q9Y221 180 aaKnown RBP eCLIP20.18■□□□□ 0.82
HDAC6-224ENST00000481929 CA12O43570 354 aa20.17■□□□□ 0.82
HDAC6-224ENST00000481929 MAP2K2P36507 400 aa20.17■□□□□ 0.82
HDAC6-224ENST00000481929 AMER1Q5JTC6 1135 aaPredicted RBP20.17■□□□□ 0.82
HDAC6-224ENST00000481929 MCOLN1Q9GZU1 580 aa20.17■□□□□ 0.82
HDAC6-224ENST00000481929 TLL2Q9Y6L7 1015 aa20.17■□□□□ 0.82
HDAC6-224ENST00000481929 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
HDAC6-224ENST00000481929 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
HDAC6-224ENST00000481929 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
HDAC6-224ENST00000481929 TRPM7Q96QT4 1865 aa20.16■□□□□ 0.82
HDAC6-224ENST00000481929 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 TRAF5O00463 557 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 KCNQ3O43525 872 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 AOC2O75106 756 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 GTF2E1P29083 439 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-224ENST00000481929 EPS15P42566 896 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 SCNN1DP51172 638 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 CST9Q5W186 159 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 USP50Q70EL3 339 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-224ENST00000481929 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
HDAC6-224ENST00000481929 PDE4DIPQ5VU43 2346 aa20.14■□□□□ 0.82
HDAC6-224ENST00000481929 RGL2O15211 777 aa20.14■□□□□ 0.81
HDAC6-224ENST00000481929 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
HDAC6-224ENST00000481929 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
HDAC6-224ENST00000481929 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms