RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 SFSWAPQ12872 951 aaKnown RBP4.97□□□□□ -1.61
USH2A-204ENST00000481786 FMNL2Q96PY5 1086 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 PRDM6Q9NQX0 595 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 SERTAD1Q9UHV2 236 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 PAX4O43316 350 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 SIN3BO75182 1162 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 ADH7P40394 386 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 SMTNP53814 917 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 GDF10P55107 478 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 PHTF2Q8N3S3 785 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 RNF112Q9ULX5 631 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 IQSEC3Q9UPP2 1182 aaPredicted RBP4.96□□□□□ -1.62
USH2A-204ENST00000481786 GJA3Q9Y6H8 435 aa4.96□□□□□ -1.62
USH2A-204ENST00000481786 YBX3P16989 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
USH2A-204ENST00000481786 SSTR4P31391 388 aa4.95□□□□□ -1.62
USH2A-204ENST00000481786 OXLD1Q5BKU9 147 aa4.95□□□□□ -1.62
USH2A-204ENST00000481786 LRRC69Q6ZNQ3 347 aa4.95□□□□□ -1.62
USH2A-204ENST00000481786 TNFRSF25Q93038 417 aa4.95□□□□□ -1.62
USH2A-204ENST00000481786 LENG1Q96BZ8 264 aaPredicted RBP4.95□□□□□ -1.62
USH2A-204ENST00000481786 SOCS7O14512 581 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 TATP17735 454 aaPredicted RBP4.94□□□□□ -1.62
USH2A-204ENST00000481786 TXKP42681 527 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 USP4Q13107 963 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 NBPF1Q3BBV0 1214 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 SAMD5Q5TGI4 173 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 BICDL1Q6ZP65 573 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 PCMTD2Q9NV79 361 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 ZDHHC3Q9NYG2 299 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 CABP1Q9NZU7 370 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 DOLKQ9UPQ8 538 aa4.94□□□□□ -1.62
USH2A-204ENST00000481786 TMEM229AB2RXF0 380 aa4.93□□□□□ -1.62
USH2A-204ENST00000481786 FZD5Q13467 585 aa4.93□□□□□ -1.62
USH2A-204ENST00000481786 LAMC2Q13753 1193 aa4.93□□□□□ -1.62
USH2A-204ENST00000481786 TMEM259Q4ZIN3 620 aa4.93□□□□□ -1.62
USH2A-204ENST00000481786 USP21Q9UK80 565 aa4.93□□□□□ -1.62
USH2A-204ENST00000481786 ZNF330Q9Y3S2 320 aaPredicted RBP4.93□□□□□ -1.62
USH2A-204ENST00000481786 ARID1BQ8NFD5 2236 aaPredicted RBP4.92□□□□□ -1.62
USH2A-204ENST00000481786 MED26O95402 600 aa4.92□□□□□ -1.62
USH2A-204ENST00000481786 TAL1P17542 331 aaPredicted RBP4.92□□□□□ -1.62
USH2A-204ENST00000481786 SPEM2Q0P670 501 aa4.92□□□□□ -1.62
USH2A-204ENST00000481786 ZDHHC1Q8WTX9 485 aa4.92□□□□□ -1.62
USH2A-204ENST00000481786 NUDT8Q8WV74 236 aa4.92□□□□□ -1.62
USH2A-204ENST00000481786 C7orf43Q8WVR3 580 aa4.92□□□□□ -1.62
USH2A-204ENST00000481786 A6NJY4 79 aa4.91□□□□□ -1.62
USH2A-204ENST00000481786 CDK2AP1O14519 115 aa4.91□□□□□ -1.62
USH2A-204ENST00000481786 LILRB5O75023 590 aa4.91□□□□□ -1.62
USH2A-204ENST00000481786 DMRTC2Q8IXT2 367 aaPredicted RBP4.91□□□□□ -1.62
USH2A-204ENST00000481786 MTMR14Q8NCE2 650 aa4.91□□□□□ -1.62
USH2A-204ENST00000481786 OAS3Q9Y6K5 1087 aaKnown RBP4.91□□□□□ -1.62
USH2A-204ENST00000481786 NOS3P29474 1203 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 IREB2P48200 963 aaKnown RBP4.9□□□□□ -1.63
USH2A-204ENST00000481786 TBC1D8BQ0IIM8 1120 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 MTFR1Q15390 333 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 SH3PXD2AQ5TCZ1 1133 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 ILDR2Q71H61 639 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 FMR1NBQ8N0W7 255 aaPredicted RBP4.9□□□□□ -1.63
USH2A-204ENST00000481786 WFDC12Q8WWY7 111 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 MEGF10Q96KG7 1140 aa4.9□□□□□ -1.63
USH2A-204ENST00000481786 JPH1Q9HDC5 661 aaPredicted RBP4.9□□□□□ -1.63
USH2A-204ENST00000481786 ADAMTS4O75173 837 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 IRAK1P51617 712 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 AFF1P51825 1210 aaKnown RBP4.89□□□□□ -1.63
USH2A-204ENST00000481786 TBCELQ5QJ74 424 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 BANK1Q8NDB2 785 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 ZNF592Q92610 1267 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 SLC4A9Q96Q91 983 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 IGFLR1Q9H665 355 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 CHIC2Q9UKJ5 165 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 RNF114Q9Y508 228 aa4.89□□□□□ -1.63
USH2A-204ENST00000481786 RAC1P63000 192 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 PRR23CQ6ZRP0 262 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 L3MBTL2Q969R5 705 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 SNRKQ9NRH2 765 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 NAGPAQ9UK23 515 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 NDUFB9Q9Y6M9 179 aa4.88□□□□□ -1.63
USH2A-204ENST00000481786 EML1O00423 815 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 CD97P48960 835 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 PLAURQ03405 335 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 SLFNL1Q499Z3 407 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 BHMTQ93088 406 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 HSH2DQ96JZ2 352 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 SLC6A14Q9UN76 642 aa4.87□□□□□ -1.63
USH2A-204ENST00000481786 FSTP19883 344 aa4.86□□□□□ -1.63
USH2A-204ENST00000481786 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
USH2A-204ENST00000481786 UBE2OQ9C0C9 1292 aaKnown RBP4.86□□□□□ -1.63
USH2A-204ENST00000481786 ALX3O95076 343 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 NOS2P35228 1153 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 GP2P55259 537 aaKnown RBP4.85□□□□□ -1.63
USH2A-204ENST00000481786 PSAPL1Q6NUJ1 521 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 ZNF280CQ8ND82 737 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 BRD7Q9NPI1 651 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 SCHIP1Q9P0W5 487 aaPredicted RBP4.85□□□□□ -1.63
USH2A-204ENST00000481786 PCDHGA11Q9Y5H2 935 aa4.85□□□□□ -1.63
USH2A-204ENST00000481786 SFI1A8K8P3 1242 aa4.84□□□□□ -1.63
USH2A-204ENST00000481786 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.84□□□□□ -1.63
USH2A-204ENST00000481786 SIRT1Q96EB6 747 aa4.84□□□□□ -1.63
USH2A-204ENST00000481786 CEP63Q96MT8 703 aa4.84□□□□□ -1.63
USH2A-204ENST00000481786 NEUROD4Q9HD90 331 aa4.84□□□□□ -1.63
USH2A-204ENST00000481786 IRF5Q13568 498 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms