RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-210ENST00000481628 ST5P78524 1137 aa12.17□□□□□ -0.46
CLIP4-210ENST00000481628 MCM10Q7L590 875 aa12.17□□□□□ -0.46
CLIP4-210ENST00000481628 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
CLIP4-210ENST00000481628 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
CLIP4-210ENST00000481628 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-210ENST00000481628 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 POTECB2RU33 542 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 C21orf2O43822 256 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-210ENST00000481628 SOGA3Q5TF21 947 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
CLIP4-210ENST00000481628 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLIP4-210ENST00000481628 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
CLIP4-210ENST00000481628 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
CLIP4-210ENST00000481628 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.46
CLIP4-210ENST00000481628 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
CLIP4-210ENST00000481628 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
CLIP4-210ENST00000481628 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
CLIP4-210ENST00000481628 TAOK3Q9H2K8 898 aa12.15□□□□□ -0.46
CLIP4-210ENST00000481628 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 DLG5Q8TDM6 1919 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 HTRA3P83110 453 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-210ENST00000481628 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
CLIP4-210ENST00000481628 SNED1Q8TER0 1413 aa12.13□□□□□ -0.47
CLIP4-210ENST00000481628 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-210ENST00000481628 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
CLIP4-210ENST00000481628 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
CLIP4-210ENST00000481628 NBPF5PQ86XG9 351 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-210ENST00000481628 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
CLIP4-210ENST00000481628 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-210ENST00000481628 NPR1P16066 1061 aa12.12□□□□□ -0.47
CLIP4-210ENST00000481628 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
CLIP4-210ENST00000481628 NPHP1O15259 732 aa12.11□□□□□ -0.47
CLIP4-210ENST00000481628 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
CLIP4-210ENST00000481628 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
CLIP4-210ENST00000481628 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-210ENST00000481628 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLIP4-210ENST00000481628 SCN4AP35499 1836 aa12.1□□□□□ -0.47
CLIP4-210ENST00000481628 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
CLIP4-210ENST00000481628 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
CLIP4-210ENST00000481628 FKBP4Q02790 459 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLIP4-210ENST00000481628 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
CLIP4-210ENST00000481628 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
CLIP4-210ENST00000481628 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
CLIP4-210ENST00000481628 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
CLIP4-210ENST00000481628 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
CLIP4-210ENST00000481628 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
CLIP4-210ENST00000481628 HLFQ16534 295 aa12.09□□□□□ -0.47
CLIP4-210ENST00000481628 NUP98P52948 1817 aa12.09□□□□□ -0.47
CLIP4-210ENST00000481628 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CLIP4-210ENST00000481628 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-210ENST00000481628 NEFMP07197 916 aa12.08□□□□□ -0.48
CLIP4-210ENST00000481628 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
CLIP4-210ENST00000481628 IQCA1LA6NCM1 817 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
CLIP4-210ENST00000481628 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 PSMD1Q99460 953 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 PNNQ9H307 717 aaKnown RBP12.06□□□□□ -0.48
CLIP4-210ENST00000481628 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-210ENST00000481628 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 ZNF541Q9H0D2 1346 aa12.06□□□□□ -0.48
CLIP4-210ENST00000481628 FZD9O00144 591 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 HOXA10P31260 410 aaPredicted RBP12.05□□□□□ -0.48
CLIP4-210ENST00000481628 COL13A1Q5TAT6 717 aaPredicted RBP12.05□□□□□ -0.48
CLIP4-210ENST00000481628 CC2D2BQ6DHV5 1058 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 TTLL7Q6ZT98 887 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
CLIP4-210ENST00000481628 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
CLIP4-210ENST00000481628 COL4A5P29400 1685 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 NTSR2O95665 410 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 HSPA1AP0DMV8 641 aaKnown RBP12.04□□□□□ -0.48
CLIP4-210ENST00000481628 HSPA1BP0DMV9 641 aaKnown RBP12.04□□□□□ -0.48
CLIP4-210ENST00000481628 IARSP41252 1262 aaKnown RBP12.04□□□□□ -0.48
CLIP4-210ENST00000481628 OLFM4Q6UX06 510 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
CLIP4-210ENST00000481628 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 ZNF34Q8IZ26 560 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 ZNF277Q9NRM2 450 aaPredicted RBP12.04□□□□□ -0.48
CLIP4-210ENST00000481628 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
CLIP4-210ENST00000481628 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
CLIP4-210ENST00000481628 GRIPAP1Q4V328 841 aa12.03□□□□□ -0.48
CLIP4-210ENST00000481628 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
CLIP4-210ENST00000481628 CNTNAP1P78357 1384 aa12.03□□□□□ -0.48
CLIP4-210ENST00000481628 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
CLIP4-210ENST00000481628 PDIA6Q15084 440 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 SUSD4Q5VX71 490 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms