RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 AOC2O75106 756 aa12.9□□□□□ -0.34
SMARCE1-210ENST00000481231 DGKZQ13574 1117 aa12.9□□□□□ -0.34
SMARCE1-210ENST00000481231 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
SMARCE1-210ENST00000481231 BRIP1Q9BX63 1249 aa12.9□□□□□ -0.34
SMARCE1-210ENST00000481231 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
SMARCE1-210ENST00000481231 ECE1P42892 770 aa12.88□□□□□ -0.35
SMARCE1-210ENST00000481231 SOX10P56693 466 aa12.88□□□□□ -0.35
SMARCE1-210ENST00000481231 AMOTQ4VCS5 1084 aa12.88□□□□□ -0.35
SMARCE1-210ENST00000481231 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
SMARCE1-210ENST00000481231 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
SMARCE1-210ENST00000481231 TRAF5O00463 557 aa12.87□□□□□ -0.35
SMARCE1-210ENST00000481231 OLFM4Q6UX06 510 aa12.87□□□□□ -0.35
SMARCE1-210ENST00000481231 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
SMARCE1-210ENST00000481231 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
SMARCE1-210ENST00000481231 SRGNP10124 158 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 CST9Q5W186 159 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
SMARCE1-210ENST00000481231 NPHP1O15259 732 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 ZNF330Q9Y3S2 320 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 SCN7AQ01118 1682 aa12.85□□□□□ -0.35
SMARCE1-210ENST00000481231 IL13P35225 146 aa12.84□□□□□ -0.35
SMARCE1-210ENST00000481231 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
SMARCE1-210ENST00000481231 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
SMARCE1-210ENST00000481231 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
SMARCE1-210ENST00000481231 FZD9O00144 591 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 MAP2K2P36507 400 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 EIF5P55010 431 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 MRC1P22897 1456 aa12.83□□□□□ -0.36
SMARCE1-210ENST00000481231 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 CA12O43570 354 aa12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 ST5P78524 1137 aa12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 GPC2Q8N158 579 aa12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
SMARCE1-210ENST00000481231 A0A087WZG4 1122 aa12.81□□□□□ -0.36
SMARCE1-210ENST00000481231 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-210ENST00000481231 EPS15P42566 896 aa12.81□□□□□ -0.36
SMARCE1-210ENST00000481231 CIAPIN1Q6FI81 312 aa12.81□□□□□ -0.36
SMARCE1-210ENST00000481231 COL4A5P29400 1685 aa12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 SCNN1DP51172 638 aa12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 SETDB2Q96T68 719 aa12.8□□□□□ -0.36
SMARCE1-210ENST00000481231 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
SMARCE1-210ENST00000481231 CAMTA2O94983 1202 aa12.78□□□□□ -0.36
SMARCE1-210ENST00000481231 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-210ENST00000481231 STARD3NLO95772 234 aa12.78□□□□□ -0.36
SMARCE1-210ENST00000481231 NPR1P16066 1061 aa12.78□□□□□ -0.36
SMARCE1-210ENST00000481231 KIF7Q2M1P5 1343 aa12.78□□□□□ -0.36
SMARCE1-210ENST00000481231 BCORQ6W2J9 1755 aa12.77□□□□□ -0.36
SMARCE1-210ENST00000481231 HMOX1P09601 288 aa12.77□□□□□ -0.37
SMARCE1-210ENST00000481231 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
SMARCE1-210ENST00000481231 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
SMARCE1-210ENST00000481231 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 ZNF408Q9H9D4 720 aa12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
SMARCE1-210ENST00000481231 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-210ENST00000481231 USP50Q70EL3 339 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-210ENST00000481231 SLC51AQ86UW1 340 aa12.75□□□□□ -0.37
SMARCE1-210ENST00000481231 GLIS2Q9BZE0 524 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-210ENST00000481231 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-210ENST00000481231 A1BGP04217 495 aa12.74□□□□□ -0.37
SMARCE1-210ENST00000481231 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-210ENST00000481231 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
SMARCE1-210ENST00000481231 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-210ENST00000481231 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 KLRG2A4D1S0 409 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 PSMD1Q99460 953 aa12.73□□□□□ -0.37
SMARCE1-210ENST00000481231 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms