RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 THRAP3Q9Y2W1 955 aaKnown RBP23.05■■□□□ 1.28
CCM2-214ENST00000481194 MYO3AQ8NEV4 1616 aa23.05■■□□□ 1.28
CCM2-214ENST00000481194 TPM4P67936 248 aa23.05■■□□□ 1.28
CCM2-214ENST00000481194 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
CCM2-214ENST00000481194 DCCP43146 1447 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 METTL22Q9BUU2 404 aaPredicted RBP23.04■■□□□ 1.28
CCM2-214ENST00000481194 PTPRUQ92729 1446 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 ARHGAP23Q9P227 1491 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 NEK4P51957 841 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 LDHAL6AQ6ZMR3 332 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 RHPN1Q8TCX5 695 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 MAP4K4O95819 1239 aaPredicted RBP23.04■■□□□ 1.28
CCM2-214ENST00000481194 TRMT2AQ8IZ69 625 aaKnown RBP23.04■■□□□ 1.28
CCM2-214ENST00000481194 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
CCM2-214ENST00000481194 LRP2BPQ9P2M1 347 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
CCM2-214ENST00000481194 PARP10Q53GL7 1025 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 IGHDP01880 384 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
CCM2-214ENST00000481194 PNPLA6Q8IY17 1366 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 RAI14Q9P0K7 980 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 USP32Q8NFA0 1604 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 UQCRFS1P1P0C7P4 283 aa23.03■■□□□ 1.28
CCM2-214ENST00000481194 SAFBQ15424 915 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCM2-214ENST00000481194 XBP1P17861 261 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 PDCP20941 246 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 PLCB2Q00722 1185 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 CEP85Q6P2H3 762 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 CWC27Q6UX04 472 aaKnown RBP23.02■■□□□ 1.28
CCM2-214ENST00000481194 PCDHB15Q9Y5E8 787 aa23.02■■□□□ 1.28
CCM2-214ENST00000481194 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
CCM2-214ENST00000481194 MAP3K12Q12852 859 aa23.01■■□□□ 1.27
CCM2-214ENST00000481194 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
CCM2-214ENST00000481194 TTC22Q5TAA0 569 aa23.01■■□□□ 1.27
CCM2-214ENST00000481194 NIP7Q9Y221 180 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCM2-214ENST00000481194 CTDP1Q9Y5B0 961 aaPredicted RBP23.01■■□□□ 1.27
CCM2-214ENST00000481194 CWC22Q9HCG8 908 aaKnown RBP23.01■■□□□ 1.27
CCM2-214ENST00000481194 ZSCAN31Q96LW9 406 aaPredicted RBP23■■□□□ 1.27
CCM2-214ENST00000481194 DCTPP1Q9H773 170 aa23■■□□□ 1.27
CCM2-214ENST00000481194 ANKIB1Q9P2G1 1089 aa23■■□□□ 1.27
CCM2-214ENST00000481194 MCTP1Q6DN14 999 aa23■■□□□ 1.27
CCM2-214ENST00000481194 CCDC191Q8NCU4 936 aa23■■□□□ 1.27
CCM2-214ENST00000481194 RLBP1P12271 317 aa23■■□□□ 1.27
CCM2-214ENST00000481194 PDIA4P13667 645 aaKnown RBP23■■□□□ 1.27
CCM2-214ENST00000481194 SLC4A3P48751 1232 aa23■■□□□ 1.27
CCM2-214ENST00000481194 SLF2Q8IX21 1173 aa23■■□□□ 1.27
CCM2-214ENST00000481194 AIDAQ96BJ3 306 aa23■■□□□ 1.27
CCM2-214ENST00000481194 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
CCM2-214ENST00000481194 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
CCM2-214ENST00000481194 ZBTB7BO15156 539 aaPredicted RBP22.99■■□□□ 1.27
CCM2-214ENST00000481194 CCDC8Q9H0W5 538 aaPredicted RBP22.99■■□□□ 1.27
CCM2-214ENST00000481194 BRMS1Q9HCU9 246 aa22.99■■□□□ 1.27
CCM2-214ENST00000481194 CCDC87Q9NVE4 849 aa22.99■■□□□ 1.27
CCM2-214ENST00000481194 TRPC5Q9UL62 973 aaPredicted RBP22.99■■□□□ 1.27
CCM2-214ENST00000481194 RASSF8Q8NHQ8 419 aa22.99■■□□□ 1.27
CCM2-214ENST00000481194 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
CCM2-214ENST00000481194 MARCH6O60337 910 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 IDH1O75874 414 aaKnown RBP22.98■■□□□ 1.27
CCM2-214ENST00000481194 BRPF1P55201 1214 aaPredicted RBP22.98■■□□□ 1.27
CCM2-214ENST00000481194 NLRP3Q96P20 1036 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 BOLA2Q9H3K6 86 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 USP19O94966 1318 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 IMMTQ16891 758 aaKnown RBP22.98■■□□□ 1.27
CCM2-214ENST00000481194 TPTE2Q6XPS3 522 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 ANKRD18AQ8IVF6 992 aa22.98■■□□□ 1.27
CCM2-214ENST00000481194 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
CCM2-214ENST00000481194 CCNL1Q9UK58 526 aaPredicted RBP22.97■■□□□ 1.27
CCM2-214ENST00000481194 LMBR1LQ6UX01 489 aa22.97■■□□□ 1.27
CCM2-214ENST00000481194 GIGYF1O75420 1035 aaPredicted RBP22.97■■□□□ 1.27
CCM2-214ENST00000481194 BLOC1S2Q6QNY1 142 aa22.97■■□□□ 1.27
CCM2-214ENST00000481194 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
CCM2-214ENST00000481194 ARHGEF28Q8N1W1 1705 aaKnown RBP22.97■■□□□ 1.27
CCM2-214ENST00000481194 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
CCM2-214ENST00000481194 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
CCM2-214ENST00000481194 ZNF496Q96IT1 587 aaPredicted RBP22.96■■□□□ 1.27
CCM2-214ENST00000481194 U3KPZ7 1027 aaPredicted RBP22.96■■□□□ 1.27
CCM2-214ENST00000481194 K7ELQ4 463 aaPredicted RBP22.95■■□□□ 1.27
CCM2-214ENST00000481194 SMC5Q8IY18 1101 aa22.95■■□□□ 1.27
CCM2-214ENST00000481194 G2E3Q7L622 706 aa22.95■■□□□ 1.26
CCM2-214ENST00000481194 ABCC4O15439 1325 aa22.95■■□□□ 1.26
CCM2-214ENST00000481194 FOXD4L5Q5VV16 416 aaPredicted RBP22.95■■□□□ 1.26
CCM2-214ENST00000481194 FOXD4L4Q8WXT5 416 aaPredicted RBP22.95■■□□□ 1.26
CCM2-214ENST00000481194 TDO2P48775 406 aa22.95■■□□□ 1.26
CCM2-214ENST00000481194 TRAPPC3LQ5T215 181 aa22.94■■□□□ 1.26
CCM2-214ENST00000481194 ZNF287Q9HBT7 754 aa22.94■■□□□ 1.26
CCM2-214ENST00000481194 ZNF853P0CG23 659 aa22.94■■□□□ 1.26
CCM2-214ENST00000481194 SPTY2D1Q68D10 685 aaPredicted RBP22.94■■□□□ 1.26
CCM2-214ENST00000481194 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
CCM2-214ENST00000481194 IRS4O14654 1257 aaPredicted RBP22.93■■□□□ 1.26
CCM2-214ENST00000481194 CWF19L2Q2TBE0 894 aaKnown RBP22.93■■□□□ 1.26
CCM2-214ENST00000481194 KDRP35968 1356 aa22.93■■□□□ 1.26
CCM2-214ENST00000481194 HMGB1P09429 215 aaKnown RBP22.93■■□□□ 1.26
CCM2-214ENST00000481194 PPP1R1BQ9UD71 204 aaPredicted RBP22.93■■□□□ 1.26
CCM2-214ENST00000481194 ZFYP08048 801 aaPredicted RBP22.92■■□□□ 1.26
CCM2-214ENST00000481194 PDRG1Q9NUG6 133 aa22.92■■□□□ 1.26
CCM2-214ENST00000481194 DDX49Q9Y6V7 483 aaKnown RBP22.92■■□□□ 1.26
CCM2-214ENST00000481194 GOLGA6L3A6NEY3 463 aa22.92■■□□□ 1.26
CCM2-214ENST00000481194 UNC5CLQ8IV45 518 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms