RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 BABAM1Q9NWV8 329 aa16.84■□□□□ 0.29
ABCF3-215ENST00000481116 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
ABCF3-215ENST00000481116 ANXA1P04083 346 aa16.83■□□□□ 0.28
ABCF3-215ENST00000481116 PRR5LQ6MZQ0 368 aa16.83■□□□□ 0.28
ABCF3-215ENST00000481116 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
ABCF3-215ENST00000481116 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
ABCF3-215ENST00000481116 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
ABCF3-215ENST00000481116 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
ABCF3-215ENST00000481116 SBF1O95248 1867 aa16.82■□□□□ 0.28
ABCF3-215ENST00000481116 PDIA6Q15084 440 aa16.81■□□□□ 0.28
ABCF3-215ENST00000481116 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
ABCF3-215ENST00000481116 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
ABCF3-215ENST00000481116 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
ABCF3-215ENST00000481116 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
ABCF3-215ENST00000481116 ZNF652Q9Y2D9 606 aa16.81■□□□□ 0.28
ABCF3-215ENST00000481116 NPHP1O15259 732 aa16.8■□□□□ 0.28
ABCF3-215ENST00000481116 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
ABCF3-215ENST00000481116 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
ABCF3-215ENST00000481116 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
ABCF3-215ENST00000481116 MBIPQ9NS73 344 aa16.8■□□□□ 0.28
ABCF3-215ENST00000481116 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
ABCF3-215ENST00000481116 LRP10Q7Z4F1 713 aa16.79■□□□□ 0.28
ABCF3-215ENST00000481116 ANKRD36CQ5JPF3 1778 aa16.79■□□□□ 0.28
ABCF3-215ENST00000481116 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 SLX4Q8IY92 1834 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 H0YIN7 160 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 ZNF853P0CG23 659 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 KIF6Q6ZMV9 814 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 NBPF5PQ86XG9 351 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-215ENST00000481116 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
ABCF3-215ENST00000481116 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.28
ABCF3-215ENST00000481116 ST5P78524 1137 aa16.77■□□□□ 0.28
ABCF3-215ENST00000481116 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.28
ABCF3-215ENST00000481116 ARFGEF2Q9Y6D5 1785 aa16.77■□□□□ 0.27
ABCF3-215ENST00000481116 TNRC6CQ9HCJ0 1690 aaKnown RBP16.76■□□□□ 0.27
ABCF3-215ENST00000481116 GPTP24298 496 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 PDE6BP35913 854 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
ABCF3-215ENST00000481116 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 TTLL6Q8N841 843 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
ABCF3-215ENST00000481116 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-215ENST00000481116 GNAI1P63096 354 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 XAGE3Q8WTP9 111 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-215ENST00000481116 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-215ENST00000481116 ADCY9O60503 1353 aa16.75■□□□□ 0.27
ABCF3-215ENST00000481116 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
ABCF3-215ENST00000481116 RGL2O15211 777 aa16.74■□□□□ 0.27
ABCF3-215ENST00000481116 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
ABCF3-215ENST00000481116 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
ABCF3-215ENST00000481116 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
ABCF3-215ENST00000481116 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
ABCF3-215ENST00000481116 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-215ENST00000481116 DDX21Q9NR30 783 aaKnown RBP eCLIP16.74■□□□□ 0.27
ABCF3-215ENST00000481116 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
ABCF3-215ENST00000481116 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
ABCF3-215ENST00000481116 SRGNP10124 158 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-215ENST00000481116 RASSF7Q02833 373 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 WWC1Q8IX03 1113 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 ZNF34Q8IZ26 560 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
ABCF3-215ENST00000481116 LAMB2P55268 1798 aa16.72■□□□□ 0.27
ABCF3-215ENST00000481116 HOXB7P09629 217 aa16.71■□□□□ 0.27
ABCF3-215ENST00000481116 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
ABCF3-215ENST00000481116 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
ABCF3-215ENST00000481116 ABCC12Q96J65 1359 aa16.71■□□□□ 0.27
ABCF3-215ENST00000481116 C21orf2O43822 256 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 PRELPP51888 382 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
ABCF3-215ENST00000481116 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
ABCF3-215ENST00000481116 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
ABCF3-215ENST00000481116 NYXQ9GZU5 481 aa16.69■□□□□ 0.26
ABCF3-215ENST00000481116 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-215ENST00000481116 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
ABCF3-215ENST00000481116 KLRG2A4D1S0 409 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-215ENST00000481116 NTSR2O95665 410 aa16.68■□□□□ 0.26
ABCF3-215ENST00000481116 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
ABCF3-215ENST00000481116 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
ABCF3-215ENST00000481116 TAF1P21675 1872 aa16.67■□□□□ 0.26
ABCF3-215ENST00000481116 NFKBIEO00221 500 aa16.67■□□□□ 0.26
ABCF3-215ENST00000481116 NPR1P16066 1061 aa16.67■□□□□ 0.26
ABCF3-215ENST00000481116 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
ABCF3-215ENST00000481116 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
ABCF3-215ENST00000481116 GPBP1L1Q9HC44 474 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-215ENST00000481116 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
ABCF3-215ENST00000481116 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
ABCF3-215ENST00000481116 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
ABCF3-215ENST00000481116 PPP1R42Q7Z4L9 355 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms