RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
MCF2L-225ENST00000480321 NAPBQ9H115 298 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 CRACR2BQ8N4Y2 399 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-225ENST00000480321 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
MCF2L-225ENST00000480321 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 ZNF213O14771 459 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-225ENST00000480321 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
MCF2L-225ENST00000480321 SLC12A7Q9Y666 1083 aa15.76■□□□□ 0.11
MCF2L-225ENST00000480321 CBX1P83916 185 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 HS1BP3Q53T59 392 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 CCDC91Q7Z6B0 441 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 PRDM10Q9NQV6 1147 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 MINDY4BA8MYZ0 360 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 EHBP1Q8NDI1 1231 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 MKNK2Q9HBH9 465 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 ANKIB1Q9P2G1 1089 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 FLIIQ13045 1269 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 SNW1Q13573 536 aaKnown RBP15.75■□□□□ 0.11
MCF2L-225ENST00000480321 FAM114A1Q8IWE2 563 aa15.75■□□□□ 0.11
MCF2L-225ENST00000480321 TTF1Q15361 905 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-225ENST00000480321 CACNA2D4Q7Z3S7 1137 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 IQCA1Q86XH1 822 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 ZNF165P49910 485 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 TMEM266Q2M3C6 531 aa15.74■□□□□ 0.11
MCF2L-225ENST00000480321 GCOM1H8Y6P7 765 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-225ENST00000480321 MYZAPP0CAP1 466 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 ZSCAN22P10073 491 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-225ENST00000480321 DZIP1Q86YF9 867 aaKnown RBP15.73■□□□□ 0.11
MCF2L-225ENST00000480321 A0A087WZG4 1122 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 TNIP1Q15025 636 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 NEBLO76041 1014 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 ADAMTS2O95450 1211 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 IGHDP01880 384 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 LUZP1Q86V48 1076 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 GIMAP7Q8NHV1 300 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-225ENST00000480321 GOLGA8AA7E2F4 631 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 GOLGA8BA8MQT2 603 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 AMPD3Q01432 767 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 CKAP2LQ8IYA6 745 aa15.73■□□□□ 0.11
MCF2L-225ENST00000480321 C16orf45Q96MC5 204 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-225ENST00000480321 CEP135Q66GS9 1140 aa15.72■□□□□ 0.11
MCF2L-225ENST00000480321 SLC5A1P13866 664 aa15.72■□□□□ 0.11
MCF2L-225ENST00000480321 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
MCF2L-225ENST00000480321 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
MCF2L-225ENST00000480321 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
MCF2L-225ENST00000480321 MAP2K1Q02750 393 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-225ENST00000480321 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-225ENST00000480321 CCDC12Q8WUD4 166 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-225ENST00000480321 NME9Q86XW9 330 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 NEK1Q96PY6 1258 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
MCF2L-225ENST00000480321 BMP15O95972 392 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 TUBB4BP68371 445 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-225ENST00000480321 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
MCF2L-225ENST00000480321 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.1
MCF2L-225ENST00000480321 KLHL10Q6JEL2 608 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 DYDC1Q8WWB3 177 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-225ENST00000480321 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 PPP4R3BQ5MIZ7 849 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 CCDC102BQ68D86 513 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 TMX3Q96JJ7 454 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 TAOK3Q9H2K8 898 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 C14orf93Q9H972 538 aaKnown RBP15.7■□□□□ 0.1
MCF2L-225ENST00000480321 TRIM21P19474 475 aaKnown RBP15.7■□□□□ 0.1
MCF2L-225ENST00000480321 SMC1AQ14683 1233 aaKnown RBP15.7■□□□□ 0.1
MCF2L-225ENST00000480321 CATIPQ7Z7H3 387 aa15.7■□□□□ 0.1
MCF2L-225ENST00000480321 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
MCF2L-225ENST00000480321 GOLIM4O00461 696 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 SSR1P43307 286 aaKnown RBP15.69■□□□□ 0.1
MCF2L-225ENST00000480321 RPGRQ92834 1020 aaKnown RBP15.69■□□□□ 0.1
MCF2L-225ENST00000480321 CCDC8Q9H0W5 538 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-225ENST00000480321 CCDC194A0A1B0GVG4 234 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 MBIPQ9NS73 344 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 ADGRL1O94910 1474 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 F6X3S4 739 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 IFIT3O14879 490 aaKnown RBP15.69■□□□□ 0.1
MCF2L-225ENST00000480321 IARSP41252 1262 aaKnown RBP15.69■□□□□ 0.1
MCF2L-225ENST00000480321 IFFO1Q0D2I5 559 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 FAM200AQ8TCP9 573 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 RMND1Q9NWS8 449 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 FOXO3O43524 673 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
MCF2L-225ENST00000480321 GOLGA6L10A0A0M3HER8 536 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 CKAP4Q07065 602 aaKnown RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 ZNF444Q8N0Y2 327 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms