RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
CCDC58-205ENST00000479899 RNF181Q9P0P0 153 aa14.73□□□□□ -0.05
CCDC58-205ENST00000479899 USP42Q9H9J4 1324 aaKnown RBP14.72□□□□□ -0.05
CCDC58-205ENST00000479899 TNRC6CQ9HCJ0 1690 aaKnown RBP14.72□□□□□ -0.05
CCDC58-205ENST00000479899 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 KCNA3P22001 575 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 DDR1Q08345 913 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 AMOTQ4VCS5 1084 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 DALRD3Q5D0E6 543 aaKnown RBP14.72□□□□□ -0.05
CCDC58-205ENST00000479899 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 PANK3Q9H999 370 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 PIM2Q9P1W9 311 aa14.72□□□□□ -0.05
CCDC58-205ENST00000479899 MAMSTRQ6ZN01 415 aa14.71□□□□□ -0.05
CCDC58-205ENST00000479899 TMEM121BQ9BXQ6 578 aaPredicted RBP14.71□□□□□ -0.05
CCDC58-205ENST00000479899 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.06
CCDC58-205ENST00000479899 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
CCDC58-205ENST00000479899 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
CCDC58-205ENST00000479899 SULT6B1Q6IMI4 303 aa14.7□□□□□ -0.06
CCDC58-205ENST00000479899 MORC1Q86VD1 984 aa14.7□□□□□ -0.06
CCDC58-205ENST00000479899 KDM2BQ8NHM5 1336 aa14.69□□□□□ -0.06
CCDC58-205ENST00000479899 RASSF7Q02833 373 aa14.69□□□□□ -0.06
CCDC58-205ENST00000479899 MICALL2Q8IY33 904 aa14.69□□□□□ -0.06
CCDC58-205ENST00000479899 DNAJC5GQ8N7S2 189 aa14.69□□□□□ -0.06
CCDC58-205ENST00000479899 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
CCDC58-205ENST00000479899 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
CCDC58-205ENST00000479899 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
CCDC58-205ENST00000479899 USPL1Q5W0Q7 1092 aa14.68□□□□□ -0.06
CCDC58-205ENST00000479899 DNAJC10Q8IXB1 793 aa14.68□□□□□ -0.06
CCDC58-205ENST00000479899 RRAGCQ9HB90 399 aa14.68□□□□□ -0.06
CCDC58-205ENST00000479899 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
CCDC58-205ENST00000479899 SBF1O95248 1867 aa14.67□□□□□ -0.06
CCDC58-205ENST00000479899 POLRMTO00411 1230 aaKnown RBP14.67□□□□□ -0.06
CCDC58-205ENST00000479899 ZPR1O75312 459 aa14.67□□□□□ -0.06
CCDC58-205ENST00000479899 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
CCDC58-205ENST00000479899 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
CCDC58-205ENST00000479899 DLEC1Q9Y238 1755 aa14.65□□□□□ -0.06
CCDC58-205ENST00000479899 COL15A1P39059 1388 aa14.65□□□□□ -0.06
CCDC58-205ENST00000479899 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC58-205ENST00000479899 SLC39A6Q13433 755 aa14.65□□□□□ -0.06
CCDC58-205ENST00000479899 KLRG1Q96E93 195 aa14.65□□□□□ -0.06
CCDC58-205ENST00000479899 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
CCDC58-205ENST00000479899 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
CCDC58-205ENST00000479899 FSTL1Q12841 308 aa14.64□□□□□ -0.07
CCDC58-205ENST00000479899 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
CCDC58-205ENST00000479899 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
CCDC58-205ENST00000479899 LGR6Q9HBX8 967 aa14.64□□□□□ -0.07
CCDC58-205ENST00000479899 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
CCDC58-205ENST00000479899 NRXN2Q9P2S2 1712 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 MRC1P22897 1456 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 HMOX1P09601 288 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 TM4SF1P30408 202 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 IL13P35225 146 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
CCDC58-205ENST00000479899 PCNTO95613 3336 aa14.62□□□□□ -0.07
CCDC58-205ENST00000479899 NFIXQ14938 502 aa14.62□□□□□ -0.07
CCDC58-205ENST00000479899 CCDC88AQ3V6T2 1871 aa14.62□□□□□ -0.07
CCDC58-205ENST00000479899 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
CCDC58-205ENST00000479899 KNSTRNQ9Y448 316 aa14.62□□□□□ -0.07
CCDC58-205ENST00000479899 CARMIL3Q8ND23 1372 aa14.61□□□□□ -0.07
CCDC58-205ENST00000479899 RNMTO43148 476 aaKnown RBP14.61□□□□□ -0.07
CCDC58-205ENST00000479899 CYP19A1P11511 503 aaPredicted RBP14.61□□□□□ -0.07
CCDC58-205ENST00000479899 COL13A1Q5TAT6 717 aaPredicted RBP14.61□□□□□ -0.07
CCDC58-205ENST00000479899 BICDL1Q6ZP65 573 aa14.61□□□□□ -0.07
CCDC58-205ENST00000479899 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
CCDC58-205ENST00000479899 UBR2Q8IWV8 1755 aa14.6□□□□□ -0.07
CCDC58-205ENST00000479899 SERPINB2P05120 415 aa14.6□□□□□ -0.07
CCDC58-205ENST00000479899 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
CCDC58-205ENST00000479899 C2CD5Q86YS7 1000 aa14.6□□□□□ -0.07
CCDC58-205ENST00000479899 NARFQ9UHQ1 456 aa14.6□□□□□ -0.07
CCDC58-205ENST00000479899 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
CCDC58-205ENST00000479899 SCN7AQ01118 1682 aa14.59□□□□□ -0.07
CCDC58-205ENST00000479899 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
CCDC58-205ENST00000479899 LMNB1P20700 586 aa14.59□□□□□ -0.07
CCDC58-205ENST00000479899 PRELPP51888 382 aa14.59□□□□□ -0.07
CCDC58-205ENST00000479899 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
CCDC58-205ENST00000479899 ZNF330Q9Y3S2 320 aaPredicted RBP14.59□□□□□ -0.07
CCDC58-205ENST00000479899 TTLL6Q8N841 843 aa14.58□□□□□ -0.08
CCDC58-205ENST00000479899 JMYQ8N9B5 988 aa14.58□□□□□ -0.08
CCDC58-205ENST00000479899 BCL2L12Q9HB09 334 aa14.58□□□□□ -0.08
CCDC58-205ENST00000479899 ANKRD31Q8N7Z5 1873 aa14.58□□□□□ -0.08
CCDC58-205ENST00000479899 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
CCDC58-205ENST00000479899 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
CCDC58-205ENST00000479899 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
CCDC58-205ENST00000479899 ZC3H4Q9UPT8 1303 aaKnown RBP14.57□□□□□ -0.08
CCDC58-205ENST00000479899 GLTPD2A6NH11 291 aa14.56□□□□□ -0.08
CCDC58-205ENST00000479899 H0YIN7 160 aa14.56□□□□□ -0.08
CCDC58-205ENST00000479899 TNS4Q8IZW8 715 aa14.56□□□□□ -0.08
CCDC58-205ENST00000479899 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
CCDC58-205ENST00000479899 ZNF622Q969S3 477 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCDC58-205ENST00000479899 CLSPNQ9HAW4 1339 aa14.56□□□□□ -0.08
CCDC58-205ENST00000479899 NFKBIEO00221 500 aa14.55□□□□□ -0.08
CCDC58-205ENST00000479899 VEGFAP15692 232 aaPredicted RBP14.55□□□□□ -0.08
CCDC58-205ENST00000479899 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
CCDC58-205ENST00000479899 TBC1D9BQ66K14 1250 aa14.54□□□□□ -0.08
CCDC58-205ENST00000479899 NPHP1O15259 732 aa14.53□□□□□ -0.08
CCDC58-205ENST00000479899 C21orf2O43822 256 aa14.53□□□□□ -0.08
CCDC58-205ENST00000479899 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
CCDC58-205ENST00000479899 STARD3NLO95772 234 aa14.53□□□□□ -0.08
CCDC58-205ENST00000479899 HSPA1AP0DMV8 641 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms