RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 NBPF7P0C2Y1 421 aaPredicted RBP24.67■■□□□ 1.54
COL13A1-208ENST00000479733 ST3GAL1Q11201 340 aa24.67■■□□□ 1.54
COL13A1-208ENST00000479733 COL9A3Q14050 684 aaPredicted RBP24.67■■□□□ 1.54
COL13A1-208ENST00000479733 ANO6Q4KMQ2 910 aa24.67■■□□□ 1.54
COL13A1-208ENST00000479733 CYP46A1Q9Y6A2 500 aa24.67■■□□□ 1.54
COL13A1-208ENST00000479733 NCBP1Q09161 790 aaKnown RBP24.66■■□□□ 1.54
COL13A1-208ENST00000479733 CDC37L1Q7L3B6 337 aa24.66■■□□□ 1.54
COL13A1-208ENST00000479733 ZNF592Q92610 1267 aa24.66■■□□□ 1.54
COL13A1-208ENST00000479733 DACT1Q9NYF0 836 aa24.66■■□□□ 1.54
COL13A1-208ENST00000479733 KCNJ4P48050 445 aa24.66■■□□□ 1.54
COL13A1-208ENST00000479733 KIF1BPQ96EK5 621 aa24.66■■□□□ 1.54
COL13A1-208ENST00000479733 GOLGA6L4A6NEF3 574 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 CTIFO43310 598 aaKnown RBP24.65■■□□□ 1.54
COL13A1-208ENST00000479733 EYA1Q99502 592 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 DLC1Q96QB1 1528 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 RAB11FIP3O75154 756 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 TNMDQ9H2S6 317 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 CBX8Q9HC52 389 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 EPB41L2O43491 1005 aaKnown RBP24.65■■□□□ 1.54
COL13A1-208ENST00000479733 KRT85P78386 507 aa24.65■■□□□ 1.54
COL13A1-208ENST00000479733 TNNT1P13805 278 aa24.64■■□□□ 1.54
COL13A1-208ENST00000479733 AMPHP49418 695 aa24.64■■□□□ 1.53
COL13A1-208ENST00000479733 HDGFL1Q5TGJ6 251 aa24.64■■□□□ 1.53
COL13A1-208ENST00000479733 TPCN1Q9ULQ1 816 aa24.63■■□□□ 1.53
COL13A1-208ENST00000479733 VPS53Q5VIR6 699 aa24.63■■□□□ 1.53
COL13A1-208ENST00000479733 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
COL13A1-208ENST00000479733 KIF20AO95235 890 aa24.62■■□□□ 1.53
COL13A1-208ENST00000479733 ZNF771Q7L3S4 317 aaPredicted RBP24.62■■□□□ 1.53
COL13A1-208ENST00000479733 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
COL13A1-208ENST00000479733 STK3Q13188 491 aa24.61■■□□□ 1.53
COL13A1-208ENST00000479733 TPD52L1Q16890 204 aaPredicted RBP24.61■■□□□ 1.53
COL13A1-208ENST00000479733 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
COL13A1-208ENST00000479733 ZSCAN31Q96LW9 406 aaPredicted RBP24.61■■□□□ 1.53
COL13A1-208ENST00000479733 ANXA1P04083 346 aa24.6■■□□□ 1.53
COL13A1-208ENST00000479733 ZSCAN25Q6NSZ9 544 aa24.6■■□□□ 1.53
COL13A1-208ENST00000479733 SH2B1Q9NRF2 756 aaPredicted RBP24.6■■□□□ 1.53
COL13A1-208ENST00000479733 POLA2Q14181 598 aa24.6■■□□□ 1.53
COL13A1-208ENST00000479733 ZSWIM6Q9HCJ5 1215 aa24.6■■□□□ 1.53
COL13A1-208ENST00000479733 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
COL13A1-208ENST00000479733 GNAT3A8MTJ3 354 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
COL13A1-208ENST00000479733 DNAJC25Q9H1X3 360 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 TSPOAP1O95153 1857 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 ARHGEF10O15013 1369 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 RICTORQ6R327 1708 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 IL17REQ8NFR9 667 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 RUFY2Q8WXA3 655 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 SPATA32Q96LK8 384 aa24.59■■□□□ 1.53
COL13A1-208ENST00000479733 ZKSCAN1P17029 563 aaPredicted RBP24.58■■□□□ 1.53
COL13A1-208ENST00000479733 GLRX3O76003 335 aaKnown RBP24.58■■□□□ 1.53
COL13A1-208ENST00000479733 ZNF75DP51815 510 aa24.58■■□□□ 1.52
COL13A1-208ENST00000479733 CCDC112Q8NEF3 446 aa24.58■■□□□ 1.52
COL13A1-208ENST00000479733 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.58■■□□□ 1.52
COL13A1-208ENST00000479733 V9GYY5 206 aaPredicted RBP24.58■■□□□ 1.52
COL13A1-208ENST00000479733 CACTINQ8WUQ7 758 aaKnown RBP24.57■■□□□ 1.52
COL13A1-208ENST00000479733 CLIP2Q9UDT6 1046 aa24.57■■□□□ 1.52
COL13A1-208ENST00000479733 RBM8AQ9Y5S9 174 aaKnown RBP24.57■■□□□ 1.52
COL13A1-208ENST00000479733 BICD2Q8TD16 824 aa24.57■■□□□ 1.52
COL13A1-208ENST00000479733 FAM227BQ96M60 508 aa24.57■■□□□ 1.52
COL13A1-208ENST00000479733 SMTNL1A8MU46 457 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 ZNF165P49910 485 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 OGFRQ9NZT2 677 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 PA2G4Q9UQ80 394 aaKnown RBP24.56■■□□□ 1.52
COL13A1-208ENST00000479733 NR1I2O75469 434 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 CCDC144BQ3MJ40 725 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 NUTM2GQ5VZR2 741 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 LARP1Q6PKG0 1096 aaKnown RBP24.56■■□□□ 1.52
COL13A1-208ENST00000479733 CCDC144CPQ8IYA2 1237 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 FEZ1Q99689 392 aa24.56■■□□□ 1.52
COL13A1-208ENST00000479733 PI4KAP2A4QPH2 592 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 ARID5BQ14865 1188 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 CLASRPQ8N2M8 674 aaKnown RBP24.55■■□□□ 1.52
COL13A1-208ENST00000479733 PI4KAP1Q8N8J0 262 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 CTNNA3Q9UI47 895 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 CREB3L3Q68CJ9 461 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 NRKQ7Z2Y5 1582 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 DIP2BQ9P265 1576 aa24.55■■□□□ 1.52
COL13A1-208ENST00000479733 C3P01024 1663 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 PEAK1Q9H792 1746 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 NECTIN1Q15223 517 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 TAF6LQ9Y6J9 622 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 OVOS2A0A0J9YW53 1432 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 OVOS2Q6IE36 1432 aa24.54■■□□□ 1.52
COL13A1-208ENST00000479733 IFIT2P09913 472 aaKnown RBP24.53■■□□□ 1.52
COL13A1-208ENST00000479733 CEBPZQ03701 1054 aaKnown RBP24.53■■□□□ 1.52
COL13A1-208ENST00000479733 MON2Q7Z3U7 1717 aa24.53■■□□□ 1.52
COL13A1-208ENST00000479733 DDX11Q96FC9 970 aa24.53■■□□□ 1.52
COL13A1-208ENST00000479733 PLA2G4DQ86XP0 818 aa24.52■■□□□ 1.52
COL13A1-208ENST00000479733 CCDC171Q6TFL3 1326 aa24.52■■□□□ 1.52
COL13A1-208ENST00000479733 USHBP1Q8N6Y0 703 aa24.52■■□□□ 1.52
COL13A1-208ENST00000479733 LEO1Q8WVC0 666 aaPredicted RBP24.52■■□□□ 1.52
COL13A1-208ENST00000479733 ECHDC1Q9NTX5 307 aa24.52■■□□□ 1.52
COL13A1-208ENST00000479733 CHPF2Q9P2E5 772 aa24.52■■□□□ 1.52
COL13A1-208ENST00000479733 CGNQ9P2M7 1197 aaKnown RBP24.52■■□□□ 1.52
COL13A1-208ENST00000479733 TM6SF1Q9BZW5 370 aa24.51■■□□□ 1.51
COL13A1-208ENST00000479733 A0A087WWV3 80 aa24.51■■□□□ 1.51
COL13A1-208ENST00000479733 USP27XA6NNY8 438 aa24.51■■□□□ 1.51
COL13A1-208ENST00000479733 CEP135Q66GS9 1140 aa24.51■■□□□ 1.51
COL13A1-208ENST00000479733 SCAND2PQ9GZW5 306 aaPredicted RBP24.51■■□□□ 1.51
COL13A1-208ENST00000479733 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms