RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
CCDC13-205ENST00000479576 PRKD2Q9BZL6 878 aa9.35□□□□□ -0.91
CCDC13-205ENST00000479576 TRPM3Q9HCF6 1732 aaPredicted RBP9.35□□□□□ -0.91
CCDC13-205ENST00000479576 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
CCDC13-205ENST00000479576 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
CCDC13-205ENST00000479576 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
CCDC13-205ENST00000479576 PXDNQ92626 1479 aa9.34□□□□□ -0.91
CCDC13-205ENST00000479576 PHLPP1O60346 1717 aa9.34□□□□□ -0.91
CCDC13-205ENST00000479576 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
CCDC13-205ENST00000479576 POLR3AO14802 1390 aaPredicted RBP9.34□□□□□ -0.91
CCDC13-205ENST00000479576 ACEP12821 1306 aa9.33□□□□□ -0.92
CCDC13-205ENST00000479576 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
CCDC13-205ENST00000479576 AP1G2O75843 785 aa9.33□□□□□ -0.92
CCDC13-205ENST00000479576 SLC19A1P41440 591 aa9.33□□□□□ -0.92
CCDC13-205ENST00000479576 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
CCDC13-205ENST00000479576 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
CCDC13-205ENST00000479576 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
CCDC13-205ENST00000479576 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
CCDC13-205ENST00000479576 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
CCDC13-205ENST00000479576 SOS2Q07890 1332 aaPredicted RBP9.32□□□□□ -0.92
CCDC13-205ENST00000479576 NPHP3Q7Z494 1330 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
CCDC13-205ENST00000479576 SSH2Q76I76 1423 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 MON2Q7Z3U7 1717 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 KRT28Q7Z3Y7 464 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
CCDC13-205ENST00000479576 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
CCDC13-205ENST00000479576 KIF7Q2M1P5 1343 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 MARF1Q9Y4F3 1742 aaKnown RBP9.31□□□□□ -0.92
CCDC13-205ENST00000479576 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
CCDC13-205ENST00000479576 RPIAP49247 311 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 PSME1Q06323 249 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 CDCA8Q53HL2 280 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 NRKQ7Z2Y5 1582 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
CCDC13-205ENST00000479576 A0A1W2PP64 1363 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 CCDC7Q96M83 1385 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
CCDC13-205ENST00000479576 CTHP32929 405 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 PDE4CQ08493 712 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 USP6P35125 1406 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 WASHC2AQ641Q2 1341 aa9.3□□□□□ -0.92
CCDC13-205ENST00000479576 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
CCDC13-205ENST00000479576 NINLQ9Y2I6 1382 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 UNC93B1Q9H1C4 597 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
CCDC13-205ENST00000479576 TNS3Q68CZ2 1445 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 SPATA31A3Q5VYP0 1347 aa9.29□□□□□ -0.92
CCDC13-205ENST00000479576 SBNO1A3KN83 1393 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 ANKRD36BQ8N2N9 1353 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 PDIA4P13667 645 aaKnown RBP9.28□□□□□ -0.92
CCDC13-205ENST00000479576 TRIM32Q13049 653 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
CCDC13-205ENST00000479576 LRRN4Q8WUT4 740 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 ARXQ96QS3 562 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
CCDC13-205ENST00000479576 JCADQ9P266 1359 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 NUTM2GQ5VZR2 741 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 HDGFL2Q7Z4V5 671 aaPredicted RBP9.27□□□□□ -0.93
CCDC13-205ENST00000479576 LRRC59Q96AG4 307 aaKnown RBP9.27□□□□□ -0.93
CCDC13-205ENST00000479576 ZMYND15Q9H091 742 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 TTC21BQ7Z4L5 1316 aa9.27□□□□□ -0.93
CCDC13-205ENST00000479576 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
CCDC13-205ENST00000479576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC13-205ENST00000479576 CARD14Q9BXL6 1004 aa9.26□□□□□ -0.93
CCDC13-205ENST00000479576 PIK3C2AO00443 1686 aa9.26□□□□□ -0.93
CCDC13-205ENST00000479576 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 EDC4Q6P2E9 1401 aaKnown RBP9.25□□□□□ -0.93
CCDC13-205ENST00000479576 NSD3Q9BZ95 1437 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 LRP6O75581 1613 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 FGD1P98174 961 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 ZNF697Q5TEC3 545 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 ZNF598Q86UK7 904 aaKnown RBP9.25□□□□□ -0.93
CCDC13-205ENST00000479576 PANK3Q9H999 370 aa9.25□□□□□ -0.93
CCDC13-205ENST00000479576 HMX1Q9NP08 348 aaPredicted RBP9.25□□□□□ -0.93
CCDC13-205ENST00000479576 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
CCDC13-205ENST00000479576 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
CCDC13-205ENST00000479576 NME9Q86XW9 330 aa9.24□□□□□ -0.93
CCDC13-205ENST00000479576 ABTB2Q8N961 1025 aa9.24□□□□□ -0.93
CCDC13-205ENST00000479576 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
CCDC13-205ENST00000479576 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
CCDC13-205ENST00000479576 NR6A1Q15406 480 aa9.22□□□□□ -0.93
CCDC13-205ENST00000479576 PHRF1Q9P1Y6 1649 aaKnown RBP9.22□□□□□ -0.93
CCDC13-205ENST00000479576 USP19O94966 1318 aa9.22□□□□□ -0.93
CCDC13-205ENST00000479576 SPATA31A6Q5VVP1 1343 aa9.22□□□□□ -0.93
CCDC13-205ENST00000479576 USP31Q70CQ4 1352 aa9.22□□□□□ -0.93
CCDC13-205ENST00000479576 KIF20BQ96Q89 1820 aa9.21□□□□□ -0.93
CCDC13-205ENST00000479576 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms