RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
SF3B1-209ENST00000479532 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
SF3B1-209ENST00000479532 ADAMTS8Q9UP79 889 aa8.58□□□□□ -1.04
SF3B1-209ENST00000479532 ITSN1Q15811 1721 aa8.57□□□□□ -1.04
SF3B1-209ENST00000479532 ST20-MTHFSA0A0A6YYL1 179 aa8.57□□□□□ -1.04
SF3B1-209ENST00000479532 DXOO77932 396 aaKnown RBP8.57□□□□□ -1.04
SF3B1-209ENST00000479532 SBNO2Q9Y2G9 1366 aa8.57□□□□□ -1.04
SF3B1-209ENST00000479532 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 TULP4Q9NRJ4 1543 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-209ENST00000479532 SIAH2O43255 324 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 CENPBP07199 599 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-209ENST00000479532 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
SF3B1-209ENST00000479532 TMF1P82094 1093 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
SF3B1-209ENST00000479532 HIRIP3Q9BW71 556 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-209ENST00000479532 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
SF3B1-209ENST00000479532 HSPA5P11021 654 aaKnown RBP8.55□□□□□ -1.04
SF3B1-209ENST00000479532 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
SF3B1-209ENST00000479532 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
SF3B1-209ENST00000479532 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
SF3B1-209ENST00000479532 SLAIN2Q9P270 581 aa8.55□□□□□ -1.04
SF3B1-209ENST00000479532 KIF1AQ12756 1690 aa8.55□□□□□ -1.04
SF3B1-209ENST00000479532 MST1RQ04912 1400 aa8.54□□□□□ -1.04
SF3B1-209ENST00000479532 ATAD2Q6PL18 1390 aa8.54□□□□□ -1.04
SF3B1-209ENST00000479532 RFC5P40937 340 aa8.54□□□□□ -1.04
SF3B1-209ENST00000479532 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
SF3B1-209ENST00000479532 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-209ENST00000479532 CLUAP1Q96AJ1 413 aa8.54□□□□□ -1.04
SF3B1-209ENST00000479532 RGPD8O14715 1765 aaPredicted RBP8.53□□□□□ -1.04
SF3B1-209ENST00000479532 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
SF3B1-209ENST00000479532 C1orf167Q5SNV9 1468 aa8.53□□□□□ -1.04
SF3B1-209ENST00000479532 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
SF3B1-209ENST00000479532 SPTLC1O15269 473 aa8.53□□□□□ -1.04
SF3B1-209ENST00000479532 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
SF3B1-209ENST00000479532 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
SF3B1-209ENST00000479532 MAN1A2O60476 641 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 NDUFV2P19404 249 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 NUDT16Q96DE0 195 aaKnown RBP8.52□□□□□ -1.05
SF3B1-209ENST00000479532 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
SF3B1-209ENST00000479532 TESK2Q96S53 571 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 TOPAZ1Q8N9V7 1692 aa8.52□□□□□ -1.05
SF3B1-209ENST00000479532 USP32Q8NFA0 1604 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 NINLQ9Y2I6 1382 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 KDM4AO75164 1064 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 IRS1P35568 1242 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 HOMEZQ8IX15 550 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 ATP7BP35670 1465 aa8.51□□□□□ -1.05
SF3B1-209ENST00000479532 A6NJR5 290 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 FOXK2Q01167 660 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 NGDNQ8NEJ9 315 aaKnown RBP8.5□□□□□ -1.05
SF3B1-209ENST00000479532 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 NPHP3Q7Z494 1330 aa8.5□□□□□ -1.05
SF3B1-209ENST00000479532 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 PPFIA3O75145 1194 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 PSME1Q06323 249 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 QPCTQ16769 361 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 BRINP3Q76B58 766 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 HDGFL2Q7Z4V5 671 aaPredicted RBP8.49□□□□□ -1.05
SF3B1-209ENST00000479532 TMC1Q8TDI8 760 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 ORAI2Q96SN7 254 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
SF3B1-209ENST00000479532 AHDC1Q5TGY3 1603 aaPredicted RBP8.49□□□□□ -1.05
SF3B1-209ENST00000479532 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 GJA5P36382 358 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 USP46P62068 366 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 BANK1Q8NDB2 785 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 POM121Q96HA1 1249 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 SNRKQ9NRH2 765 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 TERF2IPQ9NYB0 399 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 PRR36Q9H6K5 1346 aa8.48□□□□□ -1.05
SF3B1-209ENST00000479532 HOXA2O43364 376 aa8.47□□□□□ -1.05
SF3B1-209ENST00000479532 LILRB3O75022 631 aa8.47□□□□□ -1.05
SF3B1-209ENST00000479532 CABP1Q9NZU7 370 aa8.47□□□□□ -1.05
SF3B1-209ENST00000479532 AKAP12Q02952 1782 aa8.47□□□□□ -1.05
SF3B1-209ENST00000479532 APBB1O00213 710 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 FOXO3O43524 673 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 RAD21O60216 631 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 TRAK2O60296 914 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
SF3B1-209ENST00000479532 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
SF3B1-209ENST00000479532 NNTQ13423 1086 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 ACEP12821 1306 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 MYOM1P52179 1685 aa8.46□□□□□ -1.06
SF3B1-209ENST00000479532 POLR3AO14802 1390 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms