RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 AP5Z1O43299 807 aa16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 PLCB2Q00722 1185 aa16■□□□□ 0.15
PDZRN3-208ENST00000479530 GCP02774 474 aa16■□□□□ 0.15
PDZRN3-208ENST00000479530 POLA2Q14181 598 aa16■□□□□ 0.15
PDZRN3-208ENST00000479530 CCDC183Q5T5S1 534 aa16■□□□□ 0.15
PDZRN3-208ENST00000479530 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
PDZRN3-208ENST00000479530 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
PDZRN3-208ENST00000479530 HSPA4P34932 840 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 TEFQ10587 303 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 FIBPO43427 364 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 CPA1P15085 419 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 FAM184AQ8NB25 1140 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 ADCY9O60503 1353 aa15.99■□□□□ 0.15
PDZRN3-208ENST00000479530 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 UVSSAQ2YD98 709 aa15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 SYT1P21579 422 aa15.98■□□□□ 0.15
PDZRN3-208ENST00000479530 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 AK2P54819 239 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 PXDNQ92626 1479 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 KDM4AO75164 1064 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 LARGE1O95461 756 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 ARHGEF25Q86VW2 580 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 SNX14Q9Y5W7 946 aa15.97■□□□□ 0.15
PDZRN3-208ENST00000479530 NFAT5O94916 1531 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 ZSCAN20P17040 1043 aaPredicted RBP15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 CBX1P83916 185 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 PYCARDQ9ULZ3 195 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 STX6O43752 255 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 GTF2F1P35269 517 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 HMGN5P82970 282 aaKnown RBP15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 TTC14Q96N46 770 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 FUCA2Q9BTY2 467 aa15.96■□□□□ 0.15
PDZRN3-208ENST00000479530 UBE2HP62256 183 aa15.95■□□□□ 0.14
PDZRN3-208ENST00000479530 DDX17Q92841 729 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-208ENST00000479530 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
PDZRN3-208ENST00000479530 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-208ENST00000479530 PLEKHO1Q53GL0 409 aaPredicted RBP15.95■□□□□ 0.14
PDZRN3-208ENST00000479530 GIGYF1O75420 1035 aaPredicted RBP15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 ZC3H6P61129 1189 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 SLC39A6Q13433 755 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 CWC27Q6UX04 472 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 DNM1Q05193 864 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 PDE4CQ08493 712 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 KCNH5Q8NCM2 988 aa15.94■□□□□ 0.14
PDZRN3-208ENST00000479530 F13A1P00488 732 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 RGPD2P0DJD1 1756 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 RAD50Q92878 1312 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 KIF1BPQ96EK5 621 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 SGSM2O43147 1006 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 RAB11FIP3O75154 756 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 LTN1O94822 1766 aa15.93■□□□□ 0.14
PDZRN3-208ENST00000479530 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 KIAA1524Q8TCG1 905 aa15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 LSG1Q9H089 658 aaKnown RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 C1orf141Q5JVX7 400 aa15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 DMTNQ08495 405 aa15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 COL9A3Q14050 684 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 KAZALD1Q96I82 304 aa15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 C9orf78Q9NZ63 289 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-208ENST00000479530 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 CCDC83Q8IWF9 413 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 SMC3Q9UQE7 1217 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
PDZRN3-208ENST00000479530 RIOK3O14730 519 aaKnown RBP15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 CASTP20810 708 aaKnown RBP15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 CHMP3Q9Y3E7 222 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 HOXB7P09629 217 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms