RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 TBC1D2BQ9UPU7 963 aa12.07□□□□□ -0.48
ITCH-204ENST00000479215 WDR33Q9C0J8 1336 aaKnown RBP12.07□□□□□ -0.48
ITCH-204ENST00000479215 DLEC1Q9Y238 1755 aa12.06□□□□□ -0.48
ITCH-204ENST00000479215 NPR1P16066 1061 aa12.06□□□□□ -0.48
ITCH-204ENST00000479215 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
ITCH-204ENST00000479215 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
ITCH-204ENST00000479215 ZNF790Q6PG37 636 aa12.06□□□□□ -0.48
ITCH-204ENST00000479215 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
ITCH-204ENST00000479215 ZNF652Q9Y2D9 606 aa12.06□□□□□ -0.48
ITCH-204ENST00000479215 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
ITCH-204ENST00000479215 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
ITCH-204ENST00000479215 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
ITCH-204ENST00000479215 EIF4G2P78344 907 aaKnown RBP eCLIP12.05□□□□□ -0.48
ITCH-204ENST00000479215 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
ITCH-204ENST00000479215 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
ITCH-204ENST00000479215 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
ITCH-204ENST00000479215 JDP2Q8WYK2 163 aa12.05□□□□□ -0.48
ITCH-204ENST00000479215 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
ITCH-204ENST00000479215 MRC1P22897 1456 aa12.05□□□□□ -0.48
ITCH-204ENST00000479215 HMOX1P09601 288 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
ITCH-204ENST00000479215 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
ITCH-204ENST00000479215 GPC2Q8N158 579 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
ITCH-204ENST00000479215 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 CCDC88AQ3V6T2 1871 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
ITCH-204ENST00000479215 CCDC85CA6NKD9 419 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 RGL2O15211 777 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
ITCH-204ENST00000479215 RGS19P49795 217 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
ITCH-204ENST00000479215 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
ITCH-204ENST00000479215 SCN4AP35499 1836 aa12.02□□□□□ -0.48
ITCH-204ENST00000479215 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.48
ITCH-204ENST00000479215 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.49
ITCH-204ENST00000479215 FZD9O00144 591 aa12.02□□□□□ -0.49
ITCH-204ENST00000479215 CA12O43570 354 aa12.02□□□□□ -0.49
ITCH-204ENST00000479215 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
ITCH-204ENST00000479215 EIF6P56537 245 aaKnown RBP12.02□□□□□ -0.49
ITCH-204ENST00000479215 MAP1SQ66K74 1059 aaPredicted RBP12.02□□□□□ -0.49
ITCH-204ENST00000479215 DDX21Q9NR30 783 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITCH-204ENST00000479215 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
ITCH-204ENST00000479215 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
ITCH-204ENST00000479215 GTF2E1P29083 439 aaPredicted RBP12.01□□□□□ -0.49
ITCH-204ENST00000479215 MAP2K2P36507 400 aa12.01□□□□□ -0.49
ITCH-204ENST00000479215 IARSP41252 1262 aaKnown RBP12.01□□□□□ -0.49
ITCH-204ENST00000479215 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
ITCH-204ENST00000479215 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
ITCH-204ENST00000479215 PSMD1Q99460 953 aa12.01□□□□□ -0.49
ITCH-204ENST00000479215 A1BGP04217 495 aa12□□□□□ -0.49
ITCH-204ENST00000479215 CAPNS2Q96L46 248 aa12□□□□□ -0.49
ITCH-204ENST00000479215 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
ITCH-204ENST00000479215 ZNF541Q9H0D2 1346 aa12□□□□□ -0.49
ITCH-204ENST00000479215 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
ITCH-204ENST00000479215 USP50Q70EL3 339 aaPredicted RBP11.99□□□□□ -0.49
ITCH-204ENST00000479215 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
ITCH-204ENST00000479215 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
ITCH-204ENST00000479215 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
ITCH-204ENST00000479215 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
ITCH-204ENST00000479215 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITCH-204ENST00000479215 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
ITCH-204ENST00000479215 HSPA5P11021 654 aaKnown RBP11.97□□□□□ -0.49
ITCH-204ENST00000479215 GRM1Q13255 1194 aa11.97□□□□□ -0.49
ITCH-204ENST00000479215 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
ITCH-204ENST00000479215 NYXQ9GZU5 481 aa11.97□□□□□ -0.49
ITCH-204ENST00000479215 GJA3Q9Y6H8 435 aa11.97□□□□□ -0.49
ITCH-204ENST00000479215 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
ITCH-204ENST00000479215 ANKRD31Q8N7Z5 1873 aa11.96□□□□□ -0.49
ITCH-204ENST00000479215 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
ITCH-204ENST00000479215 HHIPL1Q96JK4 782 aa11.96□□□□□ -0.49
ITCH-204ENST00000479215 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
ITCH-204ENST00000479215 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
ITCH-204ENST00000479215 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
ITCH-204ENST00000479215 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
ITCH-204ENST00000479215 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
ITCH-204ENST00000479215 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
ITCH-204ENST00000479215 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
ITCH-204ENST00000479215 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
ITCH-204ENST00000479215 RPGRQ92834 1020 aaKnown RBP11.94□□□□□ -0.5
ITCH-204ENST00000479215 VIRMAQ69YN4 1812 aaKnown RBP11.94□□□□□ -0.5
ITCH-204ENST00000479215 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
ITCH-204ENST00000479215 CEMIPQ8WUJ3 1361 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 EPS15P42566 896 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 CST9Q5W186 159 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 NIM1KQ8IY84 436 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 MCOLN1Q9GZU1 580 aa11.93□□□□□ -0.5
ITCH-204ENST00000479215 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
ITCH-204ENST00000479215 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
ITCH-204ENST00000479215 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
ITCH-204ENST00000479215 SCNN1DP51172 638 aa11.92□□□□□ -0.5
ITCH-204ENST00000479215 OLFM4Q6UX06 510 aa11.92□□□□□ -0.5
ITCH-204ENST00000479215 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
ITCH-204ENST00000479215 RBM17Q96I25 401 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms