RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
CHD3-210ENST00000479080 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
CHD3-210ENST00000479080 CRBNQ96SW2 442 aa16.7■□□□□ 0.26
CHD3-210ENST00000479080 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
CHD3-210ENST00000479080 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
CHD3-210ENST00000479080 BAG6P46379 1132 aa16.69■□□□□ 0.26
CHD3-210ENST00000479080 MAP3K2Q9Y2U5 619 aa16.69■□□□□ 0.26
CHD3-210ENST00000479080 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
CHD3-210ENST00000479080 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 HLFQ16534 295 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
CHD3-210ENST00000479080 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 DNAAF4Q8WXU2 420 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 ZBTB3Q9H5J0 574 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 MAP3K15Q6ZN16 1313 aa16.68■□□□□ 0.26
CHD3-210ENST00000479080 IGKV5-2P06315 115 aa16.67■□□□□ 0.26
CHD3-210ENST00000479080 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
CHD3-210ENST00000479080 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
CHD3-210ENST00000479080 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
CHD3-210ENST00000479080 AK7Q96M32 723 aa16.67■□□□□ 0.26
CHD3-210ENST00000479080 SF3B2Q13435 895 aaKnown RBP16.66■□□□□ 0.26
CHD3-210ENST00000479080 MVPQ14764 893 aaKnown RBP16.66■□□□□ 0.26
CHD3-210ENST00000479080 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
CHD3-210ENST00000479080 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
CHD3-210ENST00000479080 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
CHD3-210ENST00000479080 MYD88Q99836 296 aa16.65■□□□□ 0.26
CHD3-210ENST00000479080 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
CHD3-210ENST00000479080 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
CHD3-210ENST00000479080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
CHD3-210ENST00000479080 PHF14O94880 888 aa16.64■□□□□ 0.25
CHD3-210ENST00000479080 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
CHD3-210ENST00000479080 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
CHD3-210ENST00000479080 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
CHD3-210ENST00000479080 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
CHD3-210ENST00000479080 ISCA1Q9BUE6 129 aa16.64■□□□□ 0.25
CHD3-210ENST00000479080 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
CHD3-210ENST00000479080 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
CHD3-210ENST00000479080 SSFA2P28290 1259 aa16.63■□□□□ 0.25
CHD3-210ENST00000479080 FKBP8Q14318 412 aa16.63■□□□□ 0.25
CHD3-210ENST00000479080 GIGYF2Q6Y7W6 1299 aaKnown RBP16.63■□□□□ 0.25
CHD3-210ENST00000479080 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
CHD3-210ENST00000479080 ANKRD36CQ5JPF3 1778 aa16.63■□□□□ 0.25
CHD3-210ENST00000479080 USP42Q9H9J4 1324 aaKnown RBP16.63■□□□□ 0.25
CHD3-210ENST00000479080 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 USPL1Q5W0Q7 1092 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
CHD3-210ENST00000479080 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 UBN2Q6ZU65 1347 aa16.62■□□□□ 0.25
CHD3-210ENST00000479080 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
CHD3-210ENST00000479080 NUP98P52948 1817 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 A0A087WZG4 1122 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
CHD3-210ENST00000479080 MS4A1P11836 297 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 ADRA2BP18089 450 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
CHD3-210ENST00000479080 TCIRG1Q13488 830 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 MEIS3Q99687 375 aa16.61■□□□□ 0.25
CHD3-210ENST00000479080 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
CHD3-210ENST00000479080 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
CHD3-210ENST00000479080 COL24A1Q17RW2 1714 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 GYS1P13807 737 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 CASP7P55210 303 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 ARXQ96QS3 562 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
CHD3-210ENST00000479080 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
CHD3-210ENST00000479080 RGL2O15211 777 aa16.58■□□□□ 0.24
CHD3-210ENST00000479080 GPTP24298 496 aa16.58■□□□□ 0.24
CHD3-210ENST00000479080 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.24
CHD3-210ENST00000479080 GCKRQ14397 625 aa16.58■□□□□ 0.24
CHD3-210ENST00000479080 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
CHD3-210ENST00000479080 UTYO14607 1347 aa16.58■□□□□ 0.24
CHD3-210ENST00000479080 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
CHD3-210ENST00000479080 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
CHD3-210ENST00000479080 TBC1D9BQ66K14 1250 aa16.57■□□□□ 0.24
CHD3-210ENST00000479080 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
CHD3-210ENST00000479080 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
CHD3-210ENST00000479080 NEFLP07196 543 aa16.56■□□□□ 0.24
CHD3-210ENST00000479080 RFC4P35249 363 aa16.56■□□□□ 0.24
CHD3-210ENST00000479080 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
CHD3-210ENST00000479080 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
CHD3-210ENST00000479080 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
CHD3-210ENST00000479080 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
CHD3-210ENST00000479080 SUSD4Q5VX71 490 aa16.55■□□□□ 0.24
CHD3-210ENST00000479080 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
CHD3-210ENST00000479080 SYNE4Q8N205 404 aa16.55■□□□□ 0.24
CHD3-210ENST00000479080 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms