RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ANKRD7Q92527 254 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 STX6O43752 255 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 LARGE1O95461 756 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 TERF2Q15554 542 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 SPC24Q8NBT2 197 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 STAP2Q9UGK3 403 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 GNAT3A8MTJ3 354 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 NLRP6P59044 892 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
LRRFIP1-211ENST00000478958 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
LRRFIP1-211ENST00000478958 FEZ2Q9UHY8 353 aaPredicted RBP13.15□□□□□ -0.3
LRRFIP1-211ENST00000478958 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
LRRFIP1-211ENST00000478958 SGSM2O43147 1006 aa13.15□□□□□ -0.3
LRRFIP1-211ENST00000478958 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
LRRFIP1-211ENST00000478958 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 RAD50Q92878 1312 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
LRRFIP1-211ENST00000478958 F13A1P00488 732 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 GJB2P29033 226 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 UBE2HP62256 183 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 CAMK4Q16566 473 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
LRRFIP1-211ENST00000478958 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 PTH1RQ03431 593 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 USP6P35125 1406 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 FLT4P35916 1363 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 TCHHQ07283 1943 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 TTC14Q96N46 770 aa13.12□□□□□ -0.31
LRRFIP1-211ENST00000478958 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 GTF2A1P52655 376 aaPredicted RBP13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 KIF1BPQ96EK5 621 aa13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 LTKP29376 864 aa13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
LRRFIP1-211ENST00000478958 AP5Z1O43299 807 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 KDM4AO75164 1064 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 KCNQ3O43525 872 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
LRRFIP1-211ENST00000478958 RAB11FIP3O75154 756 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
LRRFIP1-211ENST00000478958 C3P01024 1663 aa13.08□□□□□ -0.31
LRRFIP1-211ENST00000478958 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms