RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
SNAP47-208ENST00000478768 SLC34A2O95436 690 aa13.62□□□□□ -0.23
SNAP47-208ENST00000478768 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
SNAP47-208ENST00000478768 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
SNAP47-208ENST00000478768 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■■■■ 38.7
SNAP47-208ENST00000478768 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
SNAP47-208ENST00000478768 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
SNAP47-208ENST00000478768 MASTLQ96GX5 879 aa13.62□□□□□ -0.23
SNAP47-208ENST00000478768 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
SNAP47-208ENST00000478768 WBP1LQ9NX94 342 aa13.62□□□□□ -0.23
SNAP47-208ENST00000478768 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
SNAP47-208ENST00000478768 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
SNAP47-208ENST00000478768 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
SNAP47-208ENST00000478768 A1BGP04217 495 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 TEFQ10587 303 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 CCDC93Q567U6 631 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 HACL1Q9UJ83 578 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
SNAP47-208ENST00000478768 RASSF10A6NK89 507 aa13.59□□□□□ -0.23
SNAP47-208ENST00000478768 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
SNAP47-208ENST00000478768 HSPA8P11142 646 aaKnown RBP13.59□□□□□ -0.23
SNAP47-208ENST00000478768 EPHX2P34913 555 aa13.59□□□□□ -0.23
SNAP47-208ENST00000478768 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
SNAP47-208ENST00000478768 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
SNAP47-208ENST00000478768 DZIP3Q86Y13 1208 aaKnown RBP13.59□□□□□ -0.23
SNAP47-208ENST00000478768 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
SNAP47-208ENST00000478768 ABHD8Q96I13 439 aa13.59□□□□□ -0.23
SNAP47-208ENST00000478768 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNAP47-208ENST00000478768 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.24
SNAP47-208ENST00000478768 FMNL2Q96PY5 1086 aa13.58□□□□□ -0.24
SNAP47-208ENST00000478768 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.24
SNAP47-208ENST00000478768 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
SNAP47-208ENST00000478768 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
SNAP47-208ENST00000478768 NPR1P16066 1061 aa13.57□□□□□ -0.24
SNAP47-208ENST00000478768 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
SNAP47-208ENST00000478768 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
SNAP47-208ENST00000478768 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
SNAP47-208ENST00000478768 PNMA8AQ86V59 439 aaPredicted RBP13.57□□□□□ -0.24
SNAP47-208ENST00000478768 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
SNAP47-208ENST00000478768 CNTROBQ8N137 903 aa13.57□□□□□ -0.24
SNAP47-208ENST00000478768 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
SNAP47-208ENST00000478768 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
SNAP47-208ENST00000478768 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
SNAP47-208ENST00000478768 ABT1Q9ULW3 272 aaKnown RBP13.56□□□□□ -0.24
SNAP47-208ENST00000478768 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
SNAP47-208ENST00000478768 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
SNAP47-208ENST00000478768 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
SNAP47-208ENST00000478768 FZD9O00144 591 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 KCNQ3O43525 872 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
SNAP47-208ENST00000478768 CLEC4GQ6UXB4 293 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 GPC2Q8N158 579 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
SNAP47-208ENST00000478768 LTBP1Q14766 1721 aa13.53□□□□□ -0.24
SNAP47-208ENST00000478768 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
SNAP47-208ENST00000478768 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
SNAP47-208ENST00000478768 DDX21Q9NR30 783 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNAP47-208ENST00000478768 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
SNAP47-208ENST00000478768 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
SNAP47-208ENST00000478768 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.25
SNAP47-208ENST00000478768 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
SNAP47-208ENST00000478768 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNAP47-208ENST00000478768 CLSPNQ9HAW4 1339 aa13.52□□□□□ -0.25
SNAP47-208ENST00000478768 COL4A5P29400 1685 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 ALDH1B1P30837 517 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
SNAP47-208ENST00000478768 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
SNAP47-208ENST00000478768 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
SNAP47-208ENST00000478768 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
SNAP47-208ENST00000478768 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNAP47-208ENST00000478768 GRM1Q13255 1194 aa13.5□□□□□ -0.25
SNAP47-208ENST00000478768 PSMD1Q99460 953 aa13.5□□□□□ -0.25
SNAP47-208ENST00000478768 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
SNAP47-208ENST00000478768 PER1O15534 1290 aaPredicted RBP13.49□□□□□ -0.25
SNAP47-208ENST00000478768 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
SNAP47-208ENST00000478768 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
SNAP47-208ENST00000478768 ECE1P42892 770 aa13.49□□□□□ -0.25
SNAP47-208ENST00000478768 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
SNAP47-208ENST00000478768 CYP4F22Q6NT55 531 aa13.49□□□□□ -0.25
SNAP47-208ENST00000478768 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
SNAP47-208ENST00000478768 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 RGL2O15211 777 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 GTF2E1P29083 439 aaPredicted RBP13.48□□□□□ -0.25
SNAP47-208ENST00000478768 EPS15P42566 896 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 RGS19P49795 217 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 SCNN1DP51172 638 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
SNAP47-208ENST00000478768 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
SNAP47-208ENST00000478768 PHACTR3Q96KR7 559 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms