RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
APTX-222ENST00000478279 HEG1Q9ULI3 1381 aa14.37□□□□□ -0.11
APTX-222ENST00000478279 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
APTX-222ENST00000478279 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
APTX-222ENST00000478279 C7orf43Q8WVR3 580 aa14.37□□□□□ -0.11
APTX-222ENST00000478279 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
APTX-222ENST00000478279 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
APTX-222ENST00000478279 RASSF10A6NK89 507 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
APTX-222ENST00000478279 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 CCDC93Q567U6 631 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 EAPPQ56P03 285 aaPredicted RBP14.36□□□□□ -0.11
APTX-222ENST00000478279 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 ABHD8Q96I13 439 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 HACL1Q9UJ83 578 aa14.36□□□□□ -0.11
APTX-222ENST00000478279 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
APTX-222ENST00000478279 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
APTX-222ENST00000478279 TEFQ10587 303 aa14.35□□□□□ -0.11
APTX-222ENST00000478279 A1BGP04217 495 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 NPR1P16066 1061 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 EPHX2P34913 555 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
APTX-222ENST00000478279 FKBP4Q02790 459 aaKnown RBP eCLIP14.34□□□□□ -0.11
APTX-222ENST00000478279 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
APTX-222ENST00000478279 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
APTX-222ENST00000478279 CNTROBQ8N137 903 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
APTX-222ENST00000478279 DIAPH1O60610 1272 aaKnown RBP14.33□□□□□ -0.12
APTX-222ENST00000478279 FAM161AQ3B820 660 aa14.33□□□□□ -0.12
APTX-222ENST00000478279 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
APTX-222ENST00000478279 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
APTX-222ENST00000478279 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
APTX-222ENST00000478279 WDR33Q9C0J8 1336 aaKnown RBP14.33□□□□□ -0.12
APTX-222ENST00000478279 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
APTX-222ENST00000478279 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
APTX-222ENST00000478279 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
APTX-222ENST00000478279 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
APTX-222ENST00000478279 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
APTX-222ENST00000478279 NBPF5PQ86XG9 351 aaPredicted RBP14.32□□□□□ -0.12
APTX-222ENST00000478279 FZD9O00144 591 aa14.31□□□□□ -0.12
APTX-222ENST00000478279 RTKN2Q8IZC4 609 aa14.31□□□□□ -0.12
APTX-222ENST00000478279 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
APTX-222ENST00000478279 RNF123Q5XPI4 1314 aa14.31□□□□□ -0.12
APTX-222ENST00000478279 SIPA1L3O60292 1781 aaPredicted RBP14.3□□□□□ -0.12
APTX-222ENST00000478279 BCORQ6W2J9 1755 aa14.3□□□□□ -0.12
APTX-222ENST00000478279 GPC2Q8N158 579 aa14.3□□□□□ -0.12
APTX-222ENST00000478279 GAS2L2Q8NHY3 880 aa14.3□□□□□ -0.12
APTX-222ENST00000478279 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
APTX-222ENST00000478279 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
APTX-222ENST00000478279 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
APTX-222ENST00000478279 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
APTX-222ENST00000478279 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
APTX-222ENST00000478279 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
APTX-222ENST00000478279 KCNQ3O43525 872 aa14.28□□□□□ -0.12
APTX-222ENST00000478279 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
APTX-222ENST00000478279 RGS19P49795 217 aa14.28□□□□□ -0.12
APTX-222ENST00000478279 MLLT1Q03111 559 aaPredicted RBP14.28□□□□□ -0.12
APTX-222ENST00000478279 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
APTX-222ENST00000478279 BTBD11A6QL63 1104 aa14.27□□□□□ -0.13
APTX-222ENST00000478279 ECE1P42892 770 aa14.27□□□□□ -0.13
APTX-222ENST00000478279 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
APTX-222ENST00000478279 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
APTX-222ENST00000478279 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
APTX-222ENST00000478279 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 RGL2O15211 777 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 CAPNS2Q96L46 248 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 PSMD1Q99460 953 aa14.26□□□□□ -0.13
APTX-222ENST00000478279 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
APTX-222ENST00000478279 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
APTX-222ENST00000478279 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
APTX-222ENST00000478279 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
APTX-222ENST00000478279 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
APTX-222ENST00000478279 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
APTX-222ENST00000478279 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
APTX-222ENST00000478279 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
APTX-222ENST00000478279 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
APTX-222ENST00000478279 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
APTX-222ENST00000478279 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
APTX-222ENST00000478279 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
APTX-222ENST00000478279 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
APTX-222ENST00000478279 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
APTX-222ENST00000478279 PER1O15534 1290 aaPredicted RBP14.23□□□□□ -0.13
APTX-222ENST00000478279 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
APTX-222ENST00000478279 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
APTX-222ENST00000478279 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
APTX-222ENST00000478279 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
APTX-222ENST00000478279 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
APTX-222ENST00000478279 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 MAP2K2P36507 400 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 EPS15P42566 896 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 SCNN1DP51172 638 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 GRM1Q13255 1194 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
APTX-222ENST00000478279 CST9Q5W186 159 aa14.22□□□□□ -0.13
APTX-222ENST00000478279 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
APTX-222ENST00000478279 USP50Q70EL3 339 aaPredicted RBP14.22□□□□□ -0.13
APTX-222ENST00000478279 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms