RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ST5P78524 1137 aa27.45■■□□□ 1.98
PDLIM1-202ENST00000477757 AIDAQ96BJ3 306 aa27.45■■□□□ 1.98
PDLIM1-202ENST00000477757 MASTLQ96GX5 879 aa27.45■■□□□ 1.98
PDLIM1-202ENST00000477757 SETDB2Q96T68 719 aa27.45■■□□□ 1.98
PDLIM1-202ENST00000477757 ADAMTSL1Q8N6G6 1762 aa27.45■■□□□ 1.98
PDLIM1-202ENST00000477757 NPHP1O15259 732 aa27.44■■□□□ 1.98
PDLIM1-202ENST00000477757 TMEM88BA6NKF7 163 aa27.43■■□□□ 1.98
PDLIM1-202ENST00000477757 VEGFBP49765 207 aa27.43■■□□□ 1.98
PDLIM1-202ENST00000477757 TEFQ10587 303 aa27.43■■□□□ 1.98
PDLIM1-202ENST00000477757 DIAPH1O60610 1272 aaKnown RBP27.42■■□□□ 1.98
PDLIM1-202ENST00000477757 ITGBL1O95965 494 aaPredicted RBP27.41■■□□□ 1.98
PDLIM1-202ENST00000477757 C7orf43Q8WVR3 580 aa27.41■■□□□ 1.98
PDLIM1-202ENST00000477757 CCDC93Q567U6 631 aa27.4■■□□□ 1.98
PDLIM1-202ENST00000477757 IL17REQ8NFR9 667 aa27.4■■□□□ 1.98
PDLIM1-202ENST00000477757 FMNL2Q96PY5 1086 aa27.4■■□□□ 1.98
PDLIM1-202ENST00000477757 ZNF541Q9H0D2 1346 aa27.4■■□□□ 1.98
PDLIM1-202ENST00000477757 COL3A1P02461 1466 aaPredicted RBP27.39■■□□□ 1.98
PDLIM1-202ENST00000477757 A1BGP04217 495 aa27.39■■□□□ 1.98
PDLIM1-202ENST00000477757 NPM2Q86SE8 214 aaKnown RBP27.39■■□□□ 1.98
PDLIM1-202ENST00000477757 WBP1LQ9NX94 342 aa27.39■■□□□ 1.98
PDLIM1-202ENST00000477757 TRIM26Q12899 539 aaPredicted RBP27.38■■□□□ 1.97
PDLIM1-202ENST00000477757 GNAT3A8MTJ3 354 aa27.37■■□□□ 1.97
PDLIM1-202ENST00000477757 DZIP3Q86Y13 1208 aaKnown RBP27.37■■□□□ 1.97
PDLIM1-202ENST00000477757 GAS2L2Q8NHY3 880 aa27.37■■□□□ 1.97
PDLIM1-202ENST00000477757 CEMIPQ8WUJ3 1361 aa27.36■■□□□ 1.97
PDLIM1-202ENST00000477757 FKBP4Q02790 459 aaKnown RBP eCLIP27.36■■□□□ 1.97
PDLIM1-202ENST00000477757 EAPPQ56P03 285 aaPredicted RBP27.36■■□□□ 1.97
PDLIM1-202ENST00000477757 HACL1Q9UJ83 578 aa27.36■■□□□ 1.97
PDLIM1-202ENST00000477757 NPR1P16066 1061 aa27.35■■□□□ 1.97
PDLIM1-202ENST00000477757 LBX1P52954 281 aa27.35■■□□□ 1.97
PDLIM1-202ENST00000477757 NBPF5PQ86XG9 351 aaPredicted RBP27.35■■□□□ 1.97
PDLIM1-202ENST00000477757 RASSF10A6NK89 507 aa27.34■■□□□ 1.97
PDLIM1-202ENST00000477757 KLRG2A4D1S0 409 aaPredicted RBP27.33■■□□□ 1.97
PDLIM1-202ENST00000477757 SLC34A2O95436 690 aa27.33■■□□□ 1.97
PDLIM1-202ENST00000477757 EPHX2P34913 555 aa27.33■■□□□ 1.97
PDLIM1-202ENST00000477757 CLEC4GQ6UXB4 293 aa27.33■■□□□ 1.97
PDLIM1-202ENST00000477757 ZNF277Q9NRM2 450 aaPredicted RBP27.33■■□□□ 1.97
PDLIM1-202ENST00000477757 THSD7BQ9C0I4 1608 aa27.32■■□□□ 1.96
PDLIM1-202ENST00000477757 HSPA8P11142 646 aaKnown RBP27.31■■□□□ 1.96
PDLIM1-202ENST00000477757 PNMA8AQ86V59 439 aaPredicted RBP27.31■■□□□ 1.96
PDLIM1-202ENST00000477757 RTKN2Q8IZC4 609 aa27.3■■□□□ 1.96
PDLIM1-202ENST00000477757 CLEC11AQ9Y240 323 aa27.3■■□□□ 1.96
PDLIM1-202ENST00000477757 ZNF652Q9Y2D9 606 aa27.3■■□□□ 1.96
PDLIM1-202ENST00000477757 RNF123Q5XPI4 1314 aa27.3■■□□□ 1.96
PDLIM1-202ENST00000477757 SNED1Q8TER0 1413 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 FZD9O00144 591 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 KCNQ3O43525 872 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 DEFB115Q30KQ5 88 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 MAP1SQ66K74 1059 aaPredicted RBP27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 OLFM4Q6UX06 510 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 CNTROBQ8N137 903 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 ABHD8Q96I13 439 aa27.28■■□□□ 1.96
PDLIM1-202ENST00000477757 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 U2SURPO15042 1029 aaKnown RBP27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 RGL2O15211 777 aa27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 PIP4K2AP48426 406 aaPredicted RBP27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 MAP2K1Q02750 393 aaPredicted RBP27.27■■□□□ 1.96
PDLIM1-202ENST00000477757 WDR33Q9C0J8 1336 aaKnown RBP27.26■■□□□ 1.95
PDLIM1-202ENST00000477757 IARSP41252 1262 aaKnown RBP27.26■■□□□ 1.95
PDLIM1-202ENST00000477757 GPC2Q8N158 579 aa27.26■■□□□ 1.95
PDLIM1-202ENST00000477757 USP16Q9Y5T5 823 aa27.26■■□□□ 1.95
PDLIM1-202ENST00000477757 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
PDLIM1-202ENST00000477757 CC2D1BQ5T0F9 858 aaKnown RBP27.25■■□□□ 1.95
PDLIM1-202ENST00000477757 TPTE2Q6XPS3 522 aa27.25■■□□□ 1.95
PDLIM1-202ENST00000477757 PRAMEF22A3QJZ6 481 aa27.23■■□□□ 1.95
PDLIM1-202ENST00000477757 FAM161AQ3B820 660 aa27.23■■□□□ 1.95
PDLIM1-202ENST00000477757 ABT1Q9ULW3 272 aaKnown RBP27.23■■□□□ 1.95
PDLIM1-202ENST00000477757 NIP7Q9Y221 180 aaKnown RBP eCLIP27.23■■□□□ 1.95
PDLIM1-202ENST00000477757 LTBP1Q14766 1721 aa27.22■■□□□ 1.95
PDLIM1-202ENST00000477757 COL4A5P29400 1685 aa27.22■■□□□ 1.95
PDLIM1-202ENST00000477757 PSMD1Q99460 953 aa27.22■■□□□ 1.95
PDLIM1-202ENST00000477757 SNRPA1P09661 255 aaKnown RBP27.21■■□□□ 1.95
PDLIM1-202ENST00000477757 SYNE4Q8N205 404 aa27.21■■□□□ 1.95
PDLIM1-202ENST00000477757 NPC1L1Q9UHC9 1359 aa27.21■■□□□ 1.95
PDLIM1-202ENST00000477757 ALDH1B1P30837 517 aa27.2■■□□□ 1.94
PDLIM1-202ENST00000477757 DDX21Q9NR30 783 aaKnown RBP eCLIP27.2■■□□□ 1.94
PDLIM1-202ENST00000477757 JDP2Q8WYK2 163 aa27.19■■□□□ 1.94
PDLIM1-202ENST00000477757 PHACTR3Q96KR7 559 aa27.19■■□□□ 1.94
PDLIM1-202ENST00000477757 NBPF26B4DH59 902 aa27.18■■□□□ 1.94
PDLIM1-202ENST00000477757 NBPF10Q6P3W6 841 aaKnown RBP27.18■■□□□ 1.94
PDLIM1-202ENST00000477757 NBPF15Q8N660 670 aa27.18■■□□□ 1.94
PDLIM1-202ENST00000477757 PRKAR2BP31323 418 aa27.17■■□□□ 1.94
PDLIM1-202ENST00000477757 CRY2Q49AN0 593 aa27.17■■□□□ 1.94
PDLIM1-202ENST00000477757 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
PDLIM1-202ENST00000477757 FAM177BA6PVY3 158 aa27.16■■□□□ 1.94
PDLIM1-202ENST00000477757 CAPNS2Q96L46 248 aa27.16■■□□□ 1.94
PDLIM1-202ENST00000477757 RSPH6AQ9H0K4 717 aa27.16■■□□□ 1.94
PDLIM1-202ENST00000477757 ABCC12Q96J65 1359 aa27.16■■□□□ 1.94
PDLIM1-202ENST00000477757 LAMB4A4D0S4 1761 aa27.16■■□□□ 1.94
PDLIM1-202ENST00000477757 LMOD1P29536 600 aaPredicted RBP27.15■■□□□ 1.94
PDLIM1-202ENST00000477757 EIF6P56537 245 aaKnown RBP27.15■■□□□ 1.94
PDLIM1-202ENST00000477757 ECE1P42892 770 aa27.14■■□□□ 1.94
PDLIM1-202ENST00000477757 CC2D2BQ6DHV5 1058 aa27.14■■□□□ 1.94
PDLIM1-202ENST00000477757 GJA3Q9Y6H8 435 aa27.14■■□□□ 1.94
PDLIM1-202ENST00000477757 RIC1Q4ADV7 1423 aa27.14■■□□□ 1.93
PDLIM1-202ENST00000477757 SCNN1DP51172 638 aa27.13■■□□□ 1.93
PDLIM1-202ENST00000477757 HLFQ16534 295 aa27.13■■□□□ 1.93
PDLIM1-202ENST00000477757 TRPM7Q96QT4 1865 aa27.13■■□□□ 1.93
PDLIM1-202ENST00000477757 GTF2E1P29083 439 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms