RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
RBBP4-211ENST00000477563 CARMIL3Q8ND23 1372 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 DPY19L2Q6NUT2 758 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 C2CD5Q86YS7 1000 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 BRIP1Q9BX63 1249 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 SCN4AP35499 1836 aa10.41□□□□□ -0.74
RBBP4-211ENST00000477563 BCORQ6W2J9 1755 aa10.4□□□□□ -0.74
RBBP4-211ENST00000477563 CACNA1SQ13698 1873 aa10.4□□□□□ -0.75
RBBP4-211ENST00000477563 SLX4Q8IY92 1834 aa10.4□□□□□ -0.75
RBBP4-211ENST00000477563 A0A087WZG4 1122 aa10.39□□□□□ -0.75
RBBP4-211ENST00000477563 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
RBBP4-211ENST00000477563 PDE6BP35913 854 aa10.39□□□□□ -0.75
RBBP4-211ENST00000477563 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
RBBP4-211ENST00000477563 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
RBBP4-211ENST00000477563 STARD3NLO95772 234 aa10.38□□□□□ -0.75
RBBP4-211ENST00000477563 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
RBBP4-211ENST00000477563 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
RBBP4-211ENST00000477563 TEX13AQ9BXU3 409 aaPredicted RBP10.38□□□□□ -0.75
RBBP4-211ENST00000477563 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
RBBP4-211ENST00000477563 ADAMTSL1Q8N6G6 1762 aa10.37□□□□□ -0.75
RBBP4-211ENST00000477563 C21orf2O43822 256 aa10.37□□□□□ -0.75
RBBP4-211ENST00000477563 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
RBBP4-211ENST00000477563 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
RBBP4-211ENST00000477563 PRR5LQ6MZQ0 368 aa10.37□□□□□ -0.75
RBBP4-211ENST00000477563 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
RBBP4-211ENST00000477563 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 SRGNP10124 158 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
RBBP4-211ENST00000477563 SOGA3Q5TF21 947 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 STYK1Q6J9G0 422 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 ZNF622Q969S3 477 aaKnown RBP eCLIP10.36□□□□□ -0.753e-23■□□□□ 8.3
RBBP4-211ENST00000477563 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
RBBP4-211ENST00000477563 CNTNAP1P78357 1384 aa10.36□□□□□ -0.75
RBBP4-211ENST00000477563 HMOX1P09601 288 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
RBBP4-211ENST00000477563 TAOK3Q9H2K8 898 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 PRDM10Q9NQV6 1147 aa10.35□□□□□ -0.75
RBBP4-211ENST00000477563 COL3A1P02461 1466 aaPredicted RBP10.35□□□□□ -0.75
RBBP4-211ENST00000477563 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
RBBP4-211ENST00000477563 IQCA1LA6NCM1 817 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 RGL2O15211 777 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
RBBP4-211ENST00000477563 DIAPH1O60610 1272 aaKnown RBP10.34□□□□□ -0.75
RBBP4-211ENST00000477563 DDNO94850 711 aaPredicted RBP10.34□□□□□ -0.75
RBBP4-211ENST00000477563 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 LDHDQ86WU2 507 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 MASTLQ96GX5 879 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
RBBP4-211ENST00000477563 FOXN1O15353 648 aa10.33□□□□□ -0.76
RBBP4-211ENST00000477563 ITGBL1O95965 494 aaPredicted RBP10.33□□□□□ -0.76
RBBP4-211ENST00000477563 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
RBBP4-211ENST00000477563 CLEC4GQ6UXB4 293 aa10.33□□□□□ -0.76
RBBP4-211ENST00000477563 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
RBBP4-211ENST00000477563 TAF1DQ9H5J8 278 aaPredicted RBP10.33□□□□□ -0.76
RBBP4-211ENST00000477563 MKRN1Q9UHC7 482 aaKnown RBP10.33□□□□□ -0.76
RBBP4-211ENST00000477563 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
RBBP4-211ENST00000477563 NPC1L1Q9UHC9 1359 aa10.32□□□□□ -0.76
RBBP4-211ENST00000477563 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
RBBP4-211ENST00000477563 CNBD1Q8NA66 436 aa10.32□□□□□ -0.76
RBBP4-211ENST00000477563 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
RBBP4-211ENST00000477563 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
RBBP4-211ENST00000477563 TMEM88BA6NKF7 163 aa10.31□□□□□ -0.76
RBBP4-211ENST00000477563 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
RBBP4-211ENST00000477563 ST5P78524 1137 aa10.31□□□□□ -0.76
RBBP4-211ENST00000477563 TEFQ10587 303 aa10.31□□□□□ -0.76
RBBP4-211ENST00000477563 SNED1Q8TER0 1413 aa10.31□□□□□ -0.76
RBBP4-211ENST00000477563 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
RBBP4-211ENST00000477563 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 A1BGP04217 495 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 NPR1P16066 1061 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 CTCFP49711 727 aaPredicted RBP10.3□□□□□ -0.76
RBBP4-211ENST00000477563 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
RBBP4-211ENST00000477563 CCDC93Q567U6 631 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
RBBP4-211ENST00000477563 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
RBBP4-211ENST00000477563 WBP1LQ9NX94 342 aa10.3□□□□□ -0.76
RBBP4-211ENST00000477563 RASSF10A6NK89 507 aa10.29□□□□□ -0.76
RBBP4-211ENST00000477563 FZD9O00144 591 aa10.29□□□□□ -0.76
RBBP4-211ENST00000477563 VEGFBP49765 207 aa10.29□□□□□ -0.76
RBBP4-211ENST00000477563 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
RBBP4-211ENST00000477563 TRPM7Q96QT4 1865 aa10.28□□□□□ -0.76
RBBP4-211ENST00000477563 PNMA8AQ86V59 439 aaPredicted RBP10.28□□□□□ -0.76
RBBP4-211ENST00000477563 RTKN2Q8IZC4 609 aa10.28□□□□□ -0.76
RBBP4-211ENST00000477563 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
RBBP4-211ENST00000477563 USP16Q9Y5T5 823 aa10.28□□□□□ -0.76
RBBP4-211ENST00000477563 NUP98P52948 1817 aa10.28□□□□□ -0.76
RBBP4-211ENST00000477563 LAMB4A4D0S4 1761 aa10.27□□□□□ -0.77
RBBP4-211ENST00000477563 BTBD11A6QL63 1104 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms