RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PLEKHH2Q8IVE3 1493 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 MBD5Q9P267 1494 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 MEN1O00255 615 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
VPS45-207ENST00000477558 IL2RAP01589 272 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 BMP2P12643 396 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 GDF10P55107 478 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 DPYDQ12882 1025 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
VPS45-207ENST00000477558 SERTAD1Q9UHV2 236 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 ARHGEF5Q12774 1597 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 MLH3Q9UHC1 1453 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 MYOM3Q5VTT5 1437 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 MIA2Q96PC5 1412 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 SCAPERQ9BY12 1400 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 CCNB3Q8WWL7 1395 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ABCA6Q8N139 1617 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
VPS45-207ENST00000477558 SFI1A8K8P3 1242 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ATG7O95352 703 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ANKMY2Q8IV38 441 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 SIX5Q8N196 739 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 XAGE2Q96GT9 111 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ZFP42Q96MM3 310 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ARXQ96QS3 562 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 ZMIZ1Q9ULJ6 1067 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
VPS45-207ENST00000477558 ZFYVE16Q7Z3T8 1539 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 TRAPPC8Q9Y2L5 1435 aa8.17□□□□□ -1.1
VPS45-207ENST00000477558 DIP2CQ9Y2E4 1556 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 SPINT1O43278 529 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 UPP2O95045 317 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 INHAP05111 366 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
VPS45-207ENST00000477558 CNKSR1Q969H4 720 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 CAMSAP2Q08AD1 1489 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 TCOF1Q13428 1488 aaKnown RBP8.16□□□□□ -1.1
VPS45-207ENST00000477558 PLXNC1O60486 1568 aa8.16□□□□□ -1.1
VPS45-207ENST00000477558 LGR5O75473 907 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 CLN3Q13286 438 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 SCARF1Q14162 830 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 STK32AQ8WU08 396 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 ESYT1Q9BSJ8 1104 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 MAST1Q9Y2H9 1570 aa8.15□□□□□ -1.1
VPS45-207ENST00000477558 CROCC2H7BZ55 1655 aa8.15□□□□□ -1.11
VPS45-207ENST00000477558 RAPGEF3O95398 923 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 CENPCQ03188 943 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 POLMQ9NP87 494 aaPredicted RBP8.14□□□□□ -1.11
VPS45-207ENST00000477558 YEATS2Q9ULM3 1422 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 PTPN23Q9H3S7 1636 aa8.14□□□□□ -1.11
VPS45-207ENST00000477558 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 SEC13P55735 322 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 ELOAQ14241 798 aaKnown RBP8.13□□□□□ -1.11
VPS45-207ENST00000477558 FAM200AQ8TCP9 573 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 ADAMTSL3P82987 1691 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 ATP7AQ04656 1500 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 CCDC141Q6ZP82 1450 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 BCORL1Q5H9F3 1711 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 FGD6Q6ZV73 1430 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 ADGBQ8N7X0 1667 aa8.13□□□□□ -1.11
VPS45-207ENST00000477558 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 FIGNL2A6NMB9 653 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 TNS4Q8IZW8 715 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 TSEN2Q8NCE0 465 aaKnown RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 CFDP1Q9UEE9 299 aaPredicted RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 AGLP35573 1532 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 DNMT1P26358 1616 aaKnown RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 SHANK2Q9UPX8 1470 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 SMTNP53814 917 aa8.12□□□□□ -1.11
VPS45-207ENST00000477558 FHDC1Q9C0D6 1143 aaPredicted RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
VPS45-207ENST00000477558 RTEL1-TNFRSF6BF6WH68 1400 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 C9orf84Q5VXU9 1444 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 BACH1O14867 736 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 RNF144AP50876 292 aaPredicted RBP8.11□□□□□ -1.11
VPS45-207ENST00000477558 GAS2L2Q8NHY3 880 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 NXF1Q9UBU9 619 aaKnown RBP8.11□□□□□ -1.11
VPS45-207ENST00000477558 ATP10AO60312 1499 aa8.11□□□□□ -1.11
VPS45-207ENST00000477558 ZNF644Q9H582 1327 aaPredicted RBP8.1□□□□□ -1.11
VPS45-207ENST00000477558 TLR1Q15399 786 aa8.1□□□□□ -1.11
VPS45-207ENST00000477558 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
VPS45-207ENST00000477558 AFAP1Q8N556 730 aa8.1□□□□□ -1.11
VPS45-207ENST00000477558 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
VPS45-207ENST00000477558 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms