RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 SRGNP10124 158 aa15.09■□□□□ 0.01
HDLBP-236ENST00000477477 STYK1Q6J9G0 422 aa15.09■□□□□ 0.01
HDLBP-236ENST00000477477 ZNF652Q9Y2D9 606 aa15.09■□□□□ 0.01
HDLBP-236ENST00000477477 NBPF5PQ86XG9 351 aaPredicted RBP15.08■□□□□ 0
HDLBP-236ENST00000477477 DNAJC5GQ8N7S2 189 aa15.08■□□□□ 0
HDLBP-236ENST00000477477 CNKSR1Q969H4 720 aa15.08■□□□□ 0
HDLBP-236ENST00000477477 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
HDLBP-236ENST00000477477 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
HDLBP-236ENST00000477477 TIAM2Q8IVF5 1701 aa15.07■□□□□ 0
HDLBP-236ENST00000477477 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
HDLBP-236ENST00000477477 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
HDLBP-236ENST00000477477 MASTLQ96GX5 879 aa15.07■□□□□ 0
HDLBP-236ENST00000477477 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
HDLBP-236ENST00000477477 LTBP3Q9NS15 1303 aa15.07■□□□□ 0
HDLBP-236ENST00000477477 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
HDLBP-236ENST00000477477 NFE2L2Q16236 605 aa15.06■□□□□ 0
HDLBP-236ENST00000477477 SMC1BQ8NDV3 1235 aa15.06■□□□□ 0
HDLBP-236ENST00000477477 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
HDLBP-236ENST00000477477 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
HDLBP-236ENST00000477477 ERFEQ4G0M1 354 aa15.05■□□□□ -0
HDLBP-236ENST00000477477 IFFO2Q5TF58 517 aa15.05■□□□□ -0
HDLBP-236ENST00000477477 WDR90Q96KV7 1748 aa15.05■□□□□ -0
HDLBP-236ENST00000477477 LAMB4A4D0S4 1761 aa15.05■□□□□ -0
HDLBP-236ENST00000477477 HTRA3P83110 453 aa15.04■□□□□ -0
HDLBP-236ENST00000477477 HLFQ16534 295 aa15.04■□□□□ -0
HDLBP-236ENST00000477477 SOGA3Q5TF21 947 aa15.04■□□□□ -0
HDLBP-236ENST00000477477 TPTE2Q6XPS3 522 aa15.04■□□□□ -0
HDLBP-236ENST00000477477 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
HDLBP-236ENST00000477477 FER1L6Q2WGJ9 1857 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
HDLBP-236ENST00000477477 NPR1P16066 1061 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
HDLBP-236ENST00000477477 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 C7orf43Q8WVR3 580 aa15.03■□□□□ -0
HDLBP-236ENST00000477477 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
HDLBP-236ENST00000477477 SLX4Q8IY92 1834 aa15.02■□□□□ -0
HDLBP-236ENST00000477477 POTECB2RU33 542 aa15.02■□□□□ -0
HDLBP-236ENST00000477477 CCDC93Q567U6 631 aa15.02■□□□□ -0
HDLBP-236ENST00000477477 KLRG1Q96E93 195 aa15.02■□□□□ -0
HDLBP-236ENST00000477477 ARFGEF2Q9Y6D5 1785 aa15.02□□□□□ -0.01
HDLBP-236ENST00000477477 DLG5Q8TDM6 1919 aa15.02□□□□□ -0.01
HDLBP-236ENST00000477477 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
HDLBP-236ENST00000477477 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
HDLBP-236ENST00000477477 MAP3K15Q6ZN16 1313 aa15□□□□□ -0.01
HDLBP-236ENST00000477477 CCDC88AQ3V6T2 1871 aa15□□□□□ -0.01
HDLBP-236ENST00000477477 NGEFQ8N5V2 710 aa15□□□□□ -0.01
HDLBP-236ENST00000477477 ABCC12Q96J65 1359 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 RALBP1Q15311 655 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
HDLBP-236ENST00000477477 DICER1Q9UPY3 1922 aaKnown RBP14.99□□□□□ -0.01
HDLBP-236ENST00000477477 CACNA1SQ13698 1873 aa14.99□□□□□ -0.01
HDLBP-236ENST00000477477 ERBB4Q15303 1308 aa14.98□□□□□ -0.01
HDLBP-236ENST00000477477 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-236ENST00000477477 MYL6BP14649 208 aa14.98□□□□□ -0.01
HDLBP-236ENST00000477477 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-236ENST00000477477 FKBP4Q02790 459 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDLBP-236ENST00000477477 JMYQ8N9B5 988 aa14.98□□□□□ -0.01
HDLBP-236ENST00000477477 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
HDLBP-236ENST00000477477 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-236ENST00000477477 ALDH1B1P30837 517 aa14.97□□□□□ -0.01
HDLBP-236ENST00000477477 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
HDLBP-236ENST00000477477 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
HDLBP-236ENST00000477477 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
HDLBP-236ENST00000477477 UBN2Q6ZU65 1347 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 GPTP24298 496 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 RIPK4P57078 832 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 RIC1Q4ADV7 1423 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 OLFM4Q6UX06 510 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
HDLBP-236ENST00000477477 ZNF277Q9NRM2 450 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-236ENST00000477477 SNED1Q8TER0 1413 aa14.95□□□□□ -0.02
HDLBP-236ENST00000477477 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
HDLBP-236ENST00000477477 LRP10Q7Z4F1 713 aa14.95□□□□□ -0.02
HDLBP-236ENST00000477477 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-236ENST00000477477 BABAM1Q9NWV8 329 aa14.95□□□□□ -0.02
HDLBP-236ENST00000477477 IQCA1LA6NCM1 817 aa14.94□□□□□ -0.02
HDLBP-236ENST00000477477 LMOD3Q0VAK6 560 aa14.94□□□□□ -0.02
HDLBP-236ENST00000477477 SUSD4Q5VX71 490 aa14.94□□□□□ -0.02
HDLBP-236ENST00000477477 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
HDLBP-236ENST00000477477 GIGYF2Q6Y7W6 1299 aaKnown RBP14.94□□□□□ -0.02
HDLBP-236ENST00000477477 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
HDLBP-236ENST00000477477 MYBBP1AQ9BQG0 1328 aaKnown RBP14.93□□□□□ -0.02
HDLBP-236ENST00000477477 ZNF541Q9H0D2 1346 aa14.93□□□□□ -0.02
HDLBP-236ENST00000477477 NTSR2O95665 410 aa14.93□□□□□ -0.02
HDLBP-236ENST00000477477 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
HDLBP-236ENST00000477477 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
HDLBP-236ENST00000477477 PDIA6Q15084 440 aa14.93□□□□□ -0.02
HDLBP-236ENST00000477477 NUP98P52948 1817 aa14.92□□□□□ -0.02
HDLBP-236ENST00000477477 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
HDLBP-236ENST00000477477 HOXA10P31260 410 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-236ENST00000477477 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
HDLBP-236ENST00000477477 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
HDLBP-236ENST00000477477 PARP10Q53GL7 1025 aa14.92□□□□□ -0.02
HDLBP-236ENST00000477477 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
HDLBP-236ENST00000477477 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms