RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
COL4A5-204ENST00000477429 SLC51AQ86UW1 340 aa13.32□□□□□ -0.28
COL4A5-204ENST00000477429 BRIP1Q9BX63 1249 aa13.32□□□□□ -0.28
COL4A5-204ENST00000477429 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
COL4A5-204ENST00000477429 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
COL4A5-204ENST00000477429 EIF4G2P78344 907 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL4A5-204ENST00000477429 PRPF40BQ6NWY9 871 aaKnown RBP13.31□□□□□ -0.28
COL4A5-204ENST00000477429 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
COL4A5-204ENST00000477429 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
COL4A5-204ENST00000477429 SZT2Q5T011 3432 aa13.31□□□□□ -0.28
COL4A5-204ENST00000477429 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
COL4A5-204ENST00000477429 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
COL4A5-204ENST00000477429 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-204ENST00000477429 SRGNP10124 158 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 CASP8AP2Q9UKL3 1982 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 LTBP3Q9NS15 1303 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
COL4A5-204ENST00000477429 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-204ENST00000477429 PDE6BP35913 854 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL4A5-204ENST00000477429 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 TAOK3Q9H2K8 898 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-204ENST00000477429 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 KNSTRNQ9Y448 316 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
COL4A5-204ENST00000477429 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
COL4A5-204ENST00000477429 STARD3NLO95772 234 aa13.28□□□□□ -0.28
COL4A5-204ENST00000477429 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
COL4A5-204ENST00000477429 A0A087WZG4 1122 aa13.27□□□□□ -0.29
COL4A5-204ENST00000477429 PER1O15534 1290 aaPredicted RBP13.27□□□□□ -0.29
COL4A5-204ENST00000477429 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL4A5-204ENST00000477429 STYK1Q6J9G0 422 aa13.27□□□□□ -0.29
COL4A5-204ENST00000477429 ZNF277Q9NRM2 450 aaPredicted RBP13.27□□□□□ -0.29
COL4A5-204ENST00000477429 COL4A5P29400 1685 aa13.27□□□□□ -0.29
COL4A5-204ENST00000477429 IL6STP40189 918 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-204ENST00000477429 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-204ENST00000477429 LTBP1Q14766 1721 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 ADAMTSL1Q8N6G6 1762 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-204ENST00000477429 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
COL4A5-204ENST00000477429 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
COL4A5-204ENST00000477429 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
COL4A5-204ENST00000477429 DIAPH1O60610 1272 aaKnown RBP13.25□□□□□ -0.29
COL4A5-204ENST00000477429 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
COL4A5-204ENST00000477429 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
COL4A5-204ENST00000477429 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
COL4A5-204ENST00000477429 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
COL4A5-204ENST00000477429 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 MAP2K1Q02750 393 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-204ENST00000477429 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-204ENST00000477429 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-204ENST00000477429 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-204ENST00000477429 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
COL4A5-204ENST00000477429 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 CNKSR1Q969H4 720 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 SETDB2Q96T68 719 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
COL4A5-204ENST00000477429 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
COL4A5-204ENST00000477429 DGKZQ13574 1117 aa13.23□□□□□ -0.29
COL4A5-204ENST00000477429 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
COL4A5-204ENST00000477429 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-204ENST00000477429 TMEM88BA6NKF7 163 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 TEFQ10587 303 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 SLC17A8Q8NDX2 589 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
COL4A5-204ENST00000477429 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
COL4A5-204ENST00000477429 COL6A3P12111 3177 aa13.21□□□□□ -0.29
COL4A5-204ENST00000477429 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
COL4A5-204ENST00000477429 EPHX2P34913 555 aa13.21□□□□□ -0.29
COL4A5-204ENST00000477429 ST5P78524 1137 aa13.21□□□□□ -0.29
COL4A5-204ENST00000477429 FKBP4Q02790 459 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL4A5-204ENST00000477429 HLFQ16534 295 aa13.21□□□□□ -0.29
COL4A5-204ENST00000477429 CCDC93Q567U6 631 aa13.21□□□□□ -0.29
COL4A5-204ENST00000477429 NBPF5PQ86XG9 351 aaPredicted RBP13.21□□□□□ -0.29
COL4A5-204ENST00000477429 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
COL4A5-204ENST00000477429 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 CNTROBQ8N137 903 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 HACL1Q9UJ83 578 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 SCN4AP35499 1836 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
COL4A5-204ENST00000477429 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms