RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PDIA4P13667 645 aaKnown RBP21.5■■□□□ 1.03
VARS2-209ENST00000477288 SPTY2D1Q68D10 685 aaPredicted RBP21.5■■□□□ 1.03
VARS2-209ENST00000477288 FERMT2Q96AC1 680 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 URI1O94763 535 aaPredicted RBP21.5■■□□□ 1.03
VARS2-209ENST00000477288 TOP1P11387 765 aaKnown RBP21.5■■□□□ 1.03
VARS2-209ENST00000477288 PDCL2Q8N4E4 241 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 DNAAF4Q8WXU2 420 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 DRC1Q96MC2 740 aa21.5■■□□□ 1.03
VARS2-209ENST00000477288 MCM4P33991 863 aa21.49■■□□□ 1.03
VARS2-209ENST00000477288 FGFR1OPO95684 399 aaKnown RBP21.49■■□□□ 1.03
VARS2-209ENST00000477288 ANO10Q9NW15 660 aa21.49■■□□□ 1.03
VARS2-209ENST00000477288 HYPKQ9NX55 129 aa21.49■■□□□ 1.03
VARS2-209ENST00000477288 CEP63Q96MT8 703 aa21.48■■□□□ 1.03
VARS2-209ENST00000477288 HMGB1P09429 215 aaKnown RBP21.48■■□□□ 1.03
VARS2-209ENST00000477288 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
VARS2-209ENST00000477288 GIMAP7Q8NHV1 300 aa21.48■■□□□ 1.03
VARS2-209ENST00000477288 DDX46Q7L014 1031 aaKnown RBP21.48■■□□□ 1.03
VARS2-209ENST00000477288 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
VARS2-209ENST00000477288 CABP5Q9NP86 173 aa21.47■■□□□ 1.03
VARS2-209ENST00000477288 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
VARS2-209ENST00000477288 CCDC144CPQ8IYA2 1237 aa21.47■■□□□ 1.03
VARS2-209ENST00000477288 CIZ1Q9ULV3 898 aaPredicted RBP21.47■■□□□ 1.03
VARS2-209ENST00000477288 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
VARS2-209ENST00000477288 PTPN23Q9H3S7 1636 aa21.47■■□□□ 1.03
VARS2-209ENST00000477288 GCOM1H8Y6P7 765 aaPredicted RBP21.46■■□□□ 1.03
VARS2-209ENST00000477288 MYZAPP0CAP1 466 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 MAP9Q49MG5 647 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 CCDC184Q52MB2 194 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 TTC16Q8NEE8 873 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 SAMM50Q9Y512 469 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
VARS2-209ENST00000477288 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
VARS2-209ENST00000477288 KIF20AO95235 890 aa21.45■■□□□ 1.02
VARS2-209ENST00000477288 RFC4P35249 363 aa21.45■■□□□ 1.02
VARS2-209ENST00000477288 CDC5LQ99459 802 aaKnown RBP21.45■■□□□ 1.02
VARS2-209ENST00000477288 RNF187Q5TA31 235 aaPredicted RBP21.45■■□□□ 1.02
VARS2-209ENST00000477288 USO1O60763 962 aaKnown RBP21.45■■□□□ 1.02
VARS2-209ENST00000477288 CNNM3Q8NE01 707 aa21.45■■□□□ 1.02
VARS2-209ENST00000477288 NCOA1Q15788 1441 aa21.45■■□□□ 1.02
VARS2-209ENST00000477288 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
VARS2-209ENST00000477288 TMCO5BA8MYB1 307 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 TCERG1LQ5VWI1 586 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 TICAM2Q86XR7 235 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 SMC1AQ14683 1233 aaKnown RBP21.44■■□□□ 1.02
VARS2-209ENST00000477288 CLIP2Q9UDT6 1046 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 MAP3K2Q9Y2U5 619 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 GOLIM4O00461 696 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 PAFAH1B1P43034 410 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 TSPY2A6NKD2 308 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 ESPNB1AK53 854 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 HLA-DOAP06340 250 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 MTIF2P46199 727 aaKnown RBP21.44■■□□□ 1.02
VARS2-209ENST00000477288 KRT28Q7Z3Y7 464 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 LARP6Q9BRS8 491 aaKnown RBP21.44■■□□□ 1.02
VARS2-209ENST00000477288 KAT14Q9H8E8 782 aa21.44■■□□□ 1.02
VARS2-209ENST00000477288 SH2B1Q9NRF2 756 aaPredicted RBP21.44■■□□□ 1.02
VARS2-209ENST00000477288 PUF60Q9UHX1 559 aaKnown RBP21.44■■□□□ 1.02
VARS2-209ENST00000477288 CA8P35219 290 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 CALML4Q96GE6 196 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 LDHCP07864 332 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 PRPF4BQ13523 1007 aaKnown RBP21.43■■□□□ 1.02
VARS2-209ENST00000477288 LDHAL6AQ6ZMR3 332 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 ATP5J2-PTCD1G3V325 749 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 SSH1Q8WYL5 1049 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 YEATS4O95619 227 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 BAG3O95817 575 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 TRMT1Q9NXH9 659 aaKnown RBP21.43■■□□□ 1.02
VARS2-209ENST00000477288 KIF14Q15058 1648 aa21.43■■□□□ 1.02
VARS2-209ENST00000477288 SCAND2PQ9GZW5 306 aaPredicted RBP21.43■■□□□ 1.02
VARS2-209ENST00000477288 GRIPAP1Q4V328 841 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 SPECC1Q5M775 1068 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 CCDC183Q5T5S1 534 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 CCDC12Q8WUD4 166 aaPredicted RBP21.42■■□□□ 1.02
VARS2-209ENST00000477288 MYO1BO43795 1136 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 IDEP14735 1019 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 ST5P78524 1137 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 CETN1Q12798 172 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 HLTFQ14527 1009 aaKnown RBP eCLIP21.42■■□□□ 1.02
VARS2-209ENST00000477288 TTF1Q15361 905 aaPredicted RBP21.42■■□□□ 1.02
VARS2-209ENST00000477288 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 CCDC40Q4G0X9 1142 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 TMEM67Q5HYA8 995 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 SYCP3Q8IZU3 236 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 PPP1R42Q7Z4L9 355 aa21.42■■□□□ 1.02
VARS2-209ENST00000477288 PDE4BQ07343 736 aa21.41■■□□□ 1.02
VARS2-209ENST00000477288 GRM1Q13255 1194 aa21.41■■□□□ 1.02
VARS2-209ENST00000477288 CWC25Q9NXE8 425 aaPredicted RBP21.41■■□□□ 1.02
VARS2-209ENST00000477288 PRC1O43663 620 aa21.41■■□□□ 1.02
VARS2-209ENST00000477288 KIF18AQ8NI77 898 aa21.41■■□□□ 1.02
VARS2-209ENST00000477288 KIF5BP33176 963 aa21.41■■□□□ 1.02
VARS2-209ENST00000477288 KIF2AO00139 706 aaPredicted RBP21.41■■□□□ 1.02
VARS2-209ENST00000477288 POLR3GO15318 223 aaPredicted RBP21.41■■□□□ 1.02
VARS2-209ENST00000477288 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
VARS2-209ENST00000477288 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
VARS2-209ENST00000477288 TCP11L1Q9NUJ3 509 aa21.4■■□□□ 1.02
VARS2-209ENST00000477288 MCM3P25205 808 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms