RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, human

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMB-208	ENST00000477054	NOM1	Q5C9Z4	860 aa	Known RBP	11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	G2E3	Q7L622	706 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	ZSCAN23	Q3MJ62	389 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	FERMT3	Q86UX7	667 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	SPC24	Q8NBT2	197 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	HOMER1	Q86YM7	354 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	ANKRD20A12P	Q8NF67	263 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	TTC41P	Q6P2S7	1318 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	SNRPA1	P09661	255 aa	Known RBP	11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	TSR1	Q2NL82	804 aa	Known RBP	11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	IP6K1	Q92551	441 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	PRIMPOL	Q96LW4	560 aa		11.48	□□□□□ -0.57
GSDMB-208	ENST00000477054	KCNA6	P17658	529 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	PPP4R3B	Q5MIZ7	849 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	BRMS1	Q9HCU9	246 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	HMG20B	Q9P0W2	317 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	GJB2	P29033	226 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	IMMT	Q16891	758 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	STARD3NL	O95772	234 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	IFIT1	P09914	478 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	CHML	P26374	656 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054		G3V3G9	751 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	GRM8	O00222	908 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	PES1	O00541	588 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	CDKL5	O76039	1030 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	DCAF8	Q5TAQ9	597 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	DDX11	Q96FC9	970 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	NACAP1	Q9BZK3	213 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	CWC15	Q9P013	229 aa	Known RBP	11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	ABCA6	Q8N139	1617 aa		11.47	□□□□□ -0.57
GSDMB-208	ENST00000477054	PTCD1	O75127	700 aa	Known RBP	11.46	□□□□□ -0.57
GSDMB-208	ENST00000477054	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.46	□□□□□ -0.57
GSDMB-208	ENST00000477054	FAM177B	A6PVY3	158 aa		11.46	□□□□□ -0.57
GSDMB-208	ENST00000477054	HOXB7	P09629	217 aa		11.46	□□□□□ -0.57
GSDMB-208	ENST00000477054	LINS1	Q8NG48	757 aa		11.46	□□□□□ -0.57
GSDMB-208	ENST00000477054	SETBP1	Q9Y6X0	1596 aa		11.46	□□□□□ -0.58
GSDMB-208	ENST00000477054	ADGRB3	O60242	1522 aa		11.46	□□□□□ -0.58
GSDMB-208	ENST00000477054	ANKRD13D	Q6ZTN6	518 aa		11.46	□□□□□ -0.58
GSDMB-208	ENST00000477054	GDPD2	Q9HCC8	539 aa		11.46	□□□□□ -0.58
GSDMB-208	ENST00000477054	CALCOCO1	Q9P1Z2	691 aa		11.46	□□□□□ -0.58
GSDMB-208	ENST00000477054	MARCH6	O60337	910 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	DHX8	Q14562	1220 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	LRSAM1	Q6UWE0	723 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	CCDC47	Q96A33	483 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	INTS4	Q96HW7	963 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	RBM27	Q9P2N5	1060 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	ZSCAN22	P10073	491 aa	Predicted RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	UBE2H	P62256	183 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	UBE3B	Q7Z3V4	1068 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	LARP6	Q9BRS8	491 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	GNL3L	Q9NVN8	582 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	TMOD3	Q9NYL9	352 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	ABCA9	Q8IUA7	1624 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	LRRC59	Q96AG4	307 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	MPHOSPH8	Q99549	860 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	AOX1	Q06278	1338 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	LMTK2	Q8IWU2	1503 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	SMC2	O95347	1197 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	MPND	Q8N594	471 aa		11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	PHAX	Q9H814	394 aa	Known RBP	11.45	□□□□□ -0.58
GSDMB-208	ENST00000477054	RRP12	Q5JTH9	1297 aa	Known RBP	11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	TRIM22	Q8IYM9	498 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	MET	P08581	1390 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	GLI2	P10070	1586 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	METTL24	Q5JXM2	366 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	CEP57L1	Q8IYX8	460 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	XAGE3	Q8WTP9	111 aa		11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	CWC25	Q9NXE8	425 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	PHF23	Q9BUL5	403 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.44	□□□□□ -0.58
GSDMB-208	ENST00000477054	CCDC69	A6NI79	296 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	KDM4A	O75164	1064 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	UVSSA	Q2YD98	709 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	ZGPAT	Q8N5A5	531 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	ATP5J2-PTCD1	G3V325	749 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	RNMT	O43148	476 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	GC	P02774	474 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	SET	Q01105	290 aa	Predicted RBP	11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	ZKSCAN5	Q9Y2L8	839 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	CAMK4	Q16566	473 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	COPS6	Q7L5N1	327 aa		11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	RBM8A	Q9Y5S9	174 aa	Known RBP	11.43	□□□□□ -0.58
GSDMB-208	ENST00000477054	IFIT5	Q13325	482 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	CADPS2	Q86UW7	1296 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	NEK1	Q96PY6	1258 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	DDX19A	Q9NUU7	478 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	CEP152	O94986	1710 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	CCP110	O43303	1012 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	CCAR2	Q8N163	923 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	USP19	O94966	1318 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	RTL1	A6NKG5	1358 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	IDH1	O75874	414 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	SLC3A2	P08195	630 aa	Known RBP	11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	HSP90AB3P	Q58FF7	597 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	ZNF853	P0CG23	659 aa		11.42	□□□□□ -0.58
GSDMB-208	ENST00000477054	QRICH2	Q9H0J4	1663 aa		11.41	□□□□□ -0.58
GSDMB-208	ENST00000477054	TIGD1	Q96MW7	591 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms