RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 HIP1RO75146 1068 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 USP5P45974 858 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 TRPC1P48995 793 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 GTF2A1P52655 376 aaPredicted RBP7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 TCEAL1Q15170 157 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 ZCCHC8Q6NZY4 707 aaKnown RBP7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 CHCHD3Q9NX63 227 aaKnown RBP7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 TMEM63CQ9P1W3 806 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 RABL2AQ9UBK7 228 aaPredicted RBP7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 UNC13AQ9UPW8 1703 aa7.21□□□□□ -1.25
SPTLC3-205ENST00000476791 ESPNB1AK53 854 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 ACTN4O43707 911 aaKnown RBP7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 RASA3Q14644 834 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 NT5DC4Q86YG4 428 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 VPS37AQ8NEZ2 397 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 NKX2-3Q8TAU0 364 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 CD248Q9HCU0 757 aa7.21□□□□□ -1.26
SPTLC3-205ENST00000476791 C10orf62Q5T681 223 aaPredicted RBP7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 SULF1Q8IWU6 871 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 ARL10Q8N8L6 244 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 LZTS2Q9BRK4 669 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 GOPCQ9HD26 462 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 SUFUQ9UMX1 484 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 IL16Q14005 1332 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 ZBED6P86452 979 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 FXNQ16595 210 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 TSNAXIP1Q2TAA8 658 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 ALDH1L2Q3SY69 923 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 MAP9Q49MG5 647 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 L1TD1Q5T7N2 865 aaKnown RBP7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 FMNL3Q8IVF7 1028 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 CENPOQ9BU64 300 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 MED4Q9NPJ6 270 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 IRAK4Q9NWZ3 460 aa7.2□□□□□ -1.26
SPTLC3-205ENST00000476791 PPP1R15AO75807 674 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 XBP1P17861 261 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 ZC3H6P61129 1189 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 KCNV1Q6PIU1 500 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 CEP63Q96MT8 703 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 CHST12Q9NRB3 414 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 ZPR1O75312 459 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 TAGLNQ01995 201 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 CCDC92Q53HC0 331 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 LMBRD2Q68DH5 695 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 RWDD1Q9H446 243 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 ITM2BQ9Y287 266 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 SCINQ9Y6U3 715 aa7.19□□□□□ -1.26
SPTLC3-205ENST00000476791 BICDL2A1A5D9 508 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 KCTD2Q14681 263 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 PLEKHG6Q3KR16 790 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 TRIM74Q86UV6 250 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 TRIM73Q86UV7 250 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 MYO1HQ8N1T3 1032 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 STAG2Q8N3U4 1231 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 ANKRD33BA6NCL7 494 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 SLC27A2O14975 620 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 TLL1O43897 1013 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 HMMRO75330 724 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 NOP2P46087 812 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 FUT2Q10981 343 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 DHX8Q14562 1220 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 MTERF4Q7Z6M4 381 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 RAVER1Q8IY67 606 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 IFT122Q9HBG6 1241 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 GINM1Q9NU53 330 aa7.18□□□□□ -1.26
SPTLC3-205ENST00000476791 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 CD53P19397 219 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 PRPF38AQ8NAV1 312 aaKnown RBP7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 MTA2O94776 668 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 IL4RP24394 825 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 GCGRP47871 477 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 CLK1P49759 484 aaKnown RBP7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 ZNF132P52740 706 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 SIM2Q14190 667 aaPredicted RBP7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 AGAP3Q96P47 875 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 GPCPD1Q9NPB8 672 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 PICK1Q9NRD5 415 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 N6AMT1Q9Y5N5 214 aa7.17□□□□□ -1.26
SPTLC3-205ENST00000476791 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 NBPF7P0C2Y1 421 aaPredicted RBP7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 ENPP1P22413 925 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 PPP2R5AQ15172 486 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 EFCAB2Q5VUJ9 269 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 MYSM1Q5VVJ2 828 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 ALKBH2Q6NS38 261 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 SUGP1Q8IWZ8 645 aaKnown RBP7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 SMCR8Q8TEV9 937 aaPredicted RBP7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 REPIN1Q9BWE0 567 aaKnown RBP7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 TSPYL1Q9H0U9 437 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 CUX2O14529 1486 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 PDE4DQ08499 809 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 WASHC5Q12768 1159 aa7.16□□□□□ -1.26
SPTLC3-205ENST00000476791 TTLL12Q14166 644 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms