RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
HMGCS2-203ENST00000476640 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
HMGCS2-203ENST00000476640 CNKSR1Q969H4 720 aa17.72■□□□□ 0.43
HMGCS2-203ENST00000476640 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
HMGCS2-203ENST00000476640 SLX4Q8IY92 1834 aa17.71■□□□□ 0.43
HMGCS2-203ENST00000476640 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
HMGCS2-203ENST00000476640 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
HMGCS2-203ENST00000476640 NUP98P52948 1817 aa17.7■□□□□ 0.42
HMGCS2-203ENST00000476640 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
HMGCS2-203ENST00000476640 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
HMGCS2-203ENST00000476640 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
HMGCS2-203ENST00000476640 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
HMGCS2-203ENST00000476640 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
HMGCS2-203ENST00000476640 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
HMGCS2-203ENST00000476640 MASTLQ96GX5 879 aa17.69■□□□□ 0.42
HMGCS2-203ENST00000476640 NFKBIEO00221 500 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 C21orf2O43822 256 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 TPTE2Q6XPS3 522 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
HMGCS2-203ENST00000476640 SRGNP10124 158 aa17.67■□□□□ 0.42
HMGCS2-203ENST00000476640 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
HMGCS2-203ENST00000476640 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGCS2-203ENST00000476640 LTBP3Q9NS15 1303 aa17.67■□□□□ 0.42
HMGCS2-203ENST00000476640 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
HMGCS2-203ENST00000476640 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
HMGCS2-203ENST00000476640 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
HMGCS2-203ENST00000476640 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
HMGCS2-203ENST00000476640 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
HMGCS2-203ENST00000476640 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
HMGCS2-203ENST00000476640 PLEKHF1Q96S99 279 aa17.65■□□□□ 0.42
HMGCS2-203ENST00000476640 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
HMGCS2-203ENST00000476640 NPR1P16066 1061 aa17.64■□□□□ 0.41
HMGCS2-203ENST00000476640 GTF2E1P29083 439 aaPredicted RBP17.64■□□□□ 0.41
HMGCS2-203ENST00000476640 PRELPP51888 382 aa17.64■□□□□ 0.41
HMGCS2-203ENST00000476640 RALBP1Q15311 655 aa17.64■□□□□ 0.41
HMGCS2-203ENST00000476640 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
HMGCS2-203ENST00000476640 DNAJC5GQ8N7S2 189 aa17.63■□□□□ 0.41
HMGCS2-203ENST00000476640 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
HMGCS2-203ENST00000476640 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
HMGCS2-203ENST00000476640 EIF4A1P60842 406 aaKnown RBP17.62■□□□□ 0.41
HMGCS2-203ENST00000476640 SCN4AP35499 1836 aa17.61■□□□□ 0.41
HMGCS2-203ENST00000476640 KLRG2A4D1S0 409 aaPredicted RBP17.61■□□□□ 0.41
HMGCS2-203ENST00000476640 ALDH1B1P30837 517 aa17.61■□□□□ 0.41
HMGCS2-203ENST00000476640 CCDC93Q567U6 631 aa17.61■□□□□ 0.41
HMGCS2-203ENST00000476640 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 HLFQ16534 295 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 MAP3K15Q6ZN16 1313 aa17.6■□□□□ 0.41
HMGCS2-203ENST00000476640 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
HMGCS2-203ENST00000476640 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
HMGCS2-203ENST00000476640 KLRG1Q96E93 195 aa17.59■□□□□ 0.41
HMGCS2-203ENST00000476640 THUMPD2Q9BTF0 503 aaKnown RBP17.58■□□□□ 0.4
HMGCS2-203ENST00000476640 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
HMGCS2-203ENST00000476640 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.4
HMGCS2-203ENST00000476640 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
HMGCS2-203ENST00000476640 MYL6BP14649 208 aa17.57■□□□□ 0.4
HMGCS2-203ENST00000476640 RIPK4P57078 832 aa17.57■□□□□ 0.4
HMGCS2-203ENST00000476640 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
HMGCS2-203ENST00000476640 C7orf43Q8WVR3 580 aa17.57■□□□□ 0.4
HMGCS2-203ENST00000476640 RIC1Q4ADV7 1423 aa17.56■□□□□ 0.4
HMGCS2-203ENST00000476640 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
HMGCS2-203ENST00000476640 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
HMGCS2-203ENST00000476640 IQCA1LA6NCM1 817 aa17.55■□□□□ 0.4
HMGCS2-203ENST00000476640 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
HMGCS2-203ENST00000476640 POTECB2RU33 542 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 HTRA3P83110 453 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 GRIPAP1Q4V328 841 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 TTLL7Q6ZT98 887 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 ZBTB3Q9H5J0 574 aa17.54■□□□□ 0.4
HMGCS2-203ENST00000476640 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
HMGCS2-203ENST00000476640 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
HMGCS2-203ENST00000476640 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
HMGCS2-203ENST00000476640 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
HMGCS2-203ENST00000476640 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
HMGCS2-203ENST00000476640 GPTP24298 496 aa17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
HMGCS2-203ENST00000476640 ABCC12Q96J65 1359 aa17.52■□□□□ 0.39
HMGCS2-203ENST00000476640 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
HMGCS2-203ENST00000476640 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
HMGCS2-203ENST00000476640 PSMD1Q99460 953 aa17.51■□□□□ 0.39
HMGCS2-203ENST00000476640 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
HMGCS2-203ENST00000476640 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
HMGCS2-203ENST00000476640 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
HMGCS2-203ENST00000476640 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
HMGCS2-203ENST00000476640 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
HMGCS2-203ENST00000476640 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
HMGCS2-203ENST00000476640 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms