RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-219ENST00000476625 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
HDAC6-219ENST00000476625 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 CEMIPQ8WUJ3 1361 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 SCN4AP35499 1836 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 SRGNP10124 158 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
HDAC6-219ENST00000476625 FMNL2Q96PY5 1086 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
HDAC6-219ENST00000476625 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 NPHP1O15259 732 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 MCM10Q7L590 875 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 COL4A5P29400 1685 aa16.14■□□□□ 0.17
HDAC6-219ENST00000476625 LTBP1Q14766 1721 aa16.13■□□□□ 0.17
HDAC6-219ENST00000476625 LTBP3Q9NS15 1303 aa16.13■□□□□ 0.17
HDAC6-219ENST00000476625 NUP98P52948 1817 aa16.12■□□□□ 0.17
HDAC6-219ENST00000476625 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
HDAC6-219ENST00000476625 ST5P78524 1137 aa16.12■□□□□ 0.17
HDAC6-219ENST00000476625 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
HDAC6-219ENST00000476625 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
HDAC6-219ENST00000476625 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
HDAC6-219ENST00000476625 ZNF277Q9NRM2 450 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-219ENST00000476625 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
HDAC6-219ENST00000476625 FOXN1O15353 648 aa16.11■□□□□ 0.17
HDAC6-219ENST00000476625 C7orf43Q8WVR3 580 aa16.11■□□□□ 0.17
HDAC6-219ENST00000476625 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
HDAC6-219ENST00000476625 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
HDAC6-219ENST00000476625 HLFQ16534 295 aa16.1■□□□□ 0.17
HDAC6-219ENST00000476625 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-219ENST00000476625 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-219ENST00000476625 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
HDAC6-219ENST00000476625 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-219ENST00000476625 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-219ENST00000476625 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
HDAC6-219ENST00000476625 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
HDAC6-219ENST00000476625 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
HDAC6-219ENST00000476625 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
HDAC6-219ENST00000476625 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC6-219ENST00000476625 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC6-219ENST00000476625 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
HDAC6-219ENST00000476625 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-219ENST00000476625 VEGFBP49765 207 aa16.06■□□□□ 0.16
HDAC6-219ENST00000476625 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
HDAC6-219ENST00000476625 NPR1P16066 1061 aa16.05■□□□□ 0.16
HDAC6-219ENST00000476625 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-219ENST00000476625 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-219ENST00000476625 LDHDQ86WU2 507 aa16.05■□□□□ 0.16
HDAC6-219ENST00000476625 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
HDAC6-219ENST00000476625 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-219ENST00000476625 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
HDAC6-219ENST00000476625 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
HDAC6-219ENST00000476625 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-219ENST00000476625 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC6-219ENST00000476625 LAMB2P55268 1798 aa16.04■□□□□ 0.16
HDAC6-219ENST00000476625 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-219ENST00000476625 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
HDAC6-219ENST00000476625 IQCA1LA6NCM1 817 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
HDAC6-219ENST00000476625 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 EPHX2P34913 555 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
HDAC6-219ENST00000476625 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
HDAC6-219ENST00000476625 HACL1Q9UJ83 578 aa16.02■□□□□ 0.16
HDAC6-219ENST00000476625 TAF1P21675 1872 aa16.01■□□□□ 0.15
HDAC6-219ENST00000476625 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
HDAC6-219ENST00000476625 CLEC4GQ6UXB4 293 aa16.01■□□□□ 0.15
HDAC6-219ENST00000476625 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
HDAC6-219ENST00000476625 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
HDAC6-219ENST00000476625 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
HDAC6-219ENST00000476625 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 FZD9O00144 591 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 GPTP24298 496 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 LBX1P52954 281 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 CFAP53Q96M91 514 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 THSD7BQ9C0I4 1608 aa16■□□□□ 0.15
HDAC6-219ENST00000476625 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
HDAC6-219ENST00000476625 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
HDAC6-219ENST00000476625 MYL6BP14649 208 aa15.98■□□□□ 0.15
HDAC6-219ENST00000476625 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-219ENST00000476625 CNTROBQ8N137 903 aa15.98■□□□□ 0.15
HDAC6-219ENST00000476625 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
HDAC6-219ENST00000476625 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms