RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CLEC4GQ6UXB4 293 aa14.46□□□□□ -0.09
CDRT1-205ENST00000475944 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
CDRT1-205ENST00000475944 ZNF652Q9Y2D9 606 aa14.46□□□□□ -0.09
CDRT1-205ENST00000475944 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
CDRT1-205ENST00000475944 FER1L6Q2WGJ9 1857 aa14.46□□□□□ -0.1
CDRT1-205ENST00000475944 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
CDRT1-205ENST00000475944 SRGNP10124 158 aa14.45□□□□□ -0.1
CDRT1-205ENST00000475944 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
CDRT1-205ENST00000475944 TAOK3Q9H2K8 898 aa14.45□□□□□ -0.1
CDRT1-205ENST00000475944 HTATSF1O43719 755 aaKnown RBP14.44□□□□□ -0.1
CDRT1-205ENST00000475944 PPP2R1AP30153 589 aa14.44□□□□□ -0.1
CDRT1-205ENST00000475944 PIP4K2AP48426 406 aaPredicted RBP14.44□□□□□ -0.1
CDRT1-205ENST00000475944 PRPF40BQ6NWY9 871 aaKnown RBP14.44□□□□□ -0.1
CDRT1-205ENST00000475944 MCM10Q7L590 875 aa14.44□□□□□ -0.1
CDRT1-205ENST00000475944 MASTLQ96GX5 879 aa14.44□□□□□ -0.1
CDRT1-205ENST00000475944 DICER1Q9UPY3 1922 aaKnown RBP14.44□□□□□ -0.1
CDRT1-205ENST00000475944 ARFGEF2Q9Y6D5 1785 aa14.43□□□□□ -0.1
CDRT1-205ENST00000475944 PRAMEF22A3QJZ6 481 aa14.43□□□□□ -0.1
CDRT1-205ENST00000475944 NBPF5PQ86XG9 351 aaPredicted RBP14.43□□□□□ -0.1
CDRT1-205ENST00000475944 CACNA1SQ13698 1873 aa14.42□□□□□ -0.1
CDRT1-205ENST00000475944 RGL2O15211 777 aa14.42□□□□□ -0.1
CDRT1-205ENST00000475944 NEFMP07197 916 aa14.42□□□□□ -0.1
CDRT1-205ENST00000475944 SLX4Q8IY92 1834 aa14.41□□□□□ -0.1
CDRT1-205ENST00000475944 POTECB2RU33 542 aa14.41□□□□□ -0.1
CDRT1-205ENST00000475944 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
CDRT1-205ENST00000475944 TAF7Q15545 349 aaPredicted RBP14.41□□□□□ -0.1
CDRT1-205ENST00000475944 NPR1P16066 1061 aa14.4□□□□□ -0.1
CDRT1-205ENST00000475944 CCDC93Q567U6 631 aa14.4□□□□□ -0.1
CDRT1-205ENST00000475944 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
CDRT1-205ENST00000475944 NIP7Q9Y221 180 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDRT1-205ENST00000475944 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
CDRT1-205ENST00000475944 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
CDRT1-205ENST00000475944 NBPF15Q8N660 670 aa14.39□□□□□ -0.11
CDRT1-205ENST00000475944 LAMB4A4D0S4 1761 aa14.39□□□□□ -0.11
CDRT1-205ENST00000475944 KLRG2A4D1S0 409 aaPredicted RBP14.38□□□□□ -0.11
CDRT1-205ENST00000475944 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
CDRT1-205ENST00000475944 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
CDRT1-205ENST00000475944 IQCA1LA6NCM1 817 aa14.37□□□□□ -0.11
CDRT1-205ENST00000475944 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
CDRT1-205ENST00000475944 FKBP4Q02790 459 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDRT1-205ENST00000475944 COL13A1Q5TAT6 717 aaPredicted RBP14.37□□□□□ -0.11
CDRT1-205ENST00000475944 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
CDRT1-205ENST00000475944 PNISRQ8TF01 805 aaKnown RBP14.37□□□□□ -0.11
CDRT1-205ENST00000475944 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
CDRT1-205ENST00000475944 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
CDRT1-205ENST00000475944 HLFQ16534 295 aa14.35□□□□□ -0.11
CDRT1-205ENST00000475944 RTKN2Q8IZC4 609 aa14.35□□□□□ -0.11
CDRT1-205ENST00000475944 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
CDRT1-205ENST00000475944 NYXQ9GZU5 481 aa14.35□□□□□ -0.11
CDRT1-205ENST00000475944 CREBZFQ9NS37 354 aa14.35□□□□□ -0.11
CDRT1-205ENST00000475944 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
CDRT1-205ENST00000475944 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
CDRT1-205ENST00000475944 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CDRT1-205ENST00000475944 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
CDRT1-205ENST00000475944 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
CDRT1-205ENST00000475944 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
CDRT1-205ENST00000475944 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
CDRT1-205ENST00000475944 SCN4AP35499 1836 aa14.34□□□□□ -0.11
CDRT1-205ENST00000475944 DLG5Q8TDM6 1919 aa14.33□□□□□ -0.11
CDRT1-205ENST00000475944 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 TNS4Q8IZW8 715 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 NGEFQ8N5V2 710 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
CDRT1-205ENST00000475944 MAP3K15Q6ZN16 1313 aa14.33□□□□□ -0.12
CDRT1-205ENST00000475944 EIF4A1P60842 406 aaKnown RBP14.32□□□□□ -0.12
CDRT1-205ENST00000475944 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
CDRT1-205ENST00000475944 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
CDRT1-205ENST00000475944 TAF1DQ9H5J8 278 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-205ENST00000475944 RRP7AQ9Y3A4 280 aaKnown RBP14.32□□□□□ -0.12
CDRT1-205ENST00000475944 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
CDRT1-205ENST00000475944 IBTKQ9P2D0 1353 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-205ENST00000475944 IARSP41252 1262 aaKnown RBP14.31□□□□□ -0.12
CDRT1-205ENST00000475944 CRY2Q49AN0 593 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 OLFM4Q6UX06 510 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 ZNF541Q9H0D2 1346 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 ABCC12Q96J65 1359 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
CDRT1-205ENST00000475944 NUP98P52948 1817 aa14.3□□□□□ -0.12
CDRT1-205ENST00000475944 MYL6BP14649 208 aa14.3□□□□□ -0.12
CDRT1-205ENST00000475944 EAPPQ56P03 285 aaPredicted RBP14.3□□□□□ -0.12
CDRT1-205ENST00000475944 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
CDRT1-205ENST00000475944 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
CDRT1-205ENST00000475944 RPGRQ92834 1020 aaKnown RBP14.3□□□□□ -0.12
CDRT1-205ENST00000475944 PSMD1Q99460 953 aa14.3□□□□□ -0.12
CDRT1-205ENST00000475944 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
CDRT1-205ENST00000475944 FZD9O00144 591 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 GPTP24298 496 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 EPHX2P34913 555 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 PNMA8AQ86V59 439 aaPredicted RBP14.29□□□□□ -0.12
CDRT1-205ENST00000475944 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
CDRT1-205ENST00000475944 ZBTB3Q9H5J0 574 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
CDRT1-205ENST00000475944 CNTNAP1P78357 1384 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms