RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 HCN2Q9UL51 889 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 C2CD2LO14523 706 aa9.57□□□□□ -0.88
PRKD3-208ENST00000475912 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
PRKD3-208ENST00000475912 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
PRKD3-208ENST00000475912 BMP4P12644 408 aa9.57□□□□□ -0.88
PRKD3-208ENST00000475912 C2orf49Q9BVC5 232 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-208ENST00000475912 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
PRKD3-208ENST00000475912 CD33P20138 364 aa9.56□□□□□ -0.88
PRKD3-208ENST00000475912 SRPK2P78362 688 aaKnown RBP9.56□□□□□ -0.88
PRKD3-208ENST00000475912 TNP2Q05952 138 aa9.56□□□□□ -0.88
PRKD3-208ENST00000475912 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
PRKD3-208ENST00000475912 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
PRKD3-208ENST00000475912 OXCT2Q9BYC2 517 aaPredicted RBP9.56□□□□□ -0.88
PRKD3-208ENST00000475912 FAM157BP0CG42 384 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 BCRP11274 1271 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 IGFBP4P22692 258 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 ALDH16A1Q8IZ83 802 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 SERPINA10Q9UK55 444 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
PRKD3-208ENST00000475912 GPC6Q9Y625 555 aaPredicted RBP9.55□□□□□ -0.88
PRKD3-208ENST00000475912 SUZ12Q15022 739 aaKnown RBP9.53□□□□□ -0.88
PRKD3-208ENST00000475912 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
PRKD3-208ENST00000475912 EFSO43281 561 aa9.52□□□□□ -0.89
PRKD3-208ENST00000475912 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
PRKD3-208ENST00000475912 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
PRKD3-208ENST00000475912 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
PRKD3-208ENST00000475912 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
PRKD3-208ENST00000475912 C1orf115Q9H7X2 142 aa9.52□□□□□ -0.89
PRKD3-208ENST00000475912 WEE1P30291 646 aa9.51□□□□□ -0.89
PRKD3-208ENST00000475912 C1orf229Q6ZS94 237 aaPredicted RBP9.51□□□□□ -0.89
PRKD3-208ENST00000475912 SUSD3Q96L08 255 aa9.51□□□□□ -0.89
PRKD3-208ENST00000475912 ENAMQ9NRM1 1142 aa9.51□□□□□ -0.89
PRKD3-208ENST00000475912 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
PRKD3-208ENST00000475912 OIP5O43482 229 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 ATG7O95352 703 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
PRKD3-208ENST00000475912 FAM182BQ5T319 152 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
PRKD3-208ENST00000475912 GDF2Q9UK05 429 aaPredicted RBP9.5□□□□□ -0.89
PRKD3-208ENST00000475912 ACIN1Q9UKV3 1341 aaKnown RBP9.5□□□□□ -0.89
PRKD3-208ENST00000475912 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
PRKD3-208ENST00000475912 GALNT6Q8NCL4 622 aa9.49□□□□□ -0.89
PRKD3-208ENST00000475912 PRIMPOLQ96LW4 560 aa9.49□□□□□ -0.89
PRKD3-208ENST00000475912 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
PRKD3-208ENST00000475912 SHISA8B8ZZ34 492 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 FOXO3O43524 673 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 ARAFP10398 606 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
PRKD3-208ENST00000475912 LAMC2Q13753 1193 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 GRIN2CQ14957 1233 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 RTN1Q16799 776 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 LRRC4BQ9NT99 713 aa9.48□□□□□ -0.89
PRKD3-208ENST00000475912 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 PRMT3O60678 531 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 SLCO4C1Q6ZQN7 724 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 EDARADDQ8WWZ3 215 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
PRKD3-208ENST00000475912 DNMT3AQ9Y6K1 912 aaPredicted RBP9.47□□□□□ -0.89
PRKD3-208ENST00000475912 TYRO3Q06418 890 aa9.46□□□□□ -0.9
PRKD3-208ENST00000475912 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
PRKD3-208ENST00000475912 TMEM164Q5U3C3 297 aa9.46□□□□□ -0.9
PRKD3-208ENST00000475912 KLF15Q9UIH9 416 aa9.46□□□□□ -0.9
PRKD3-208ENST00000475912 PRR12Q9ULL5 1215 aa9.46□□□□□ -0.9
PRKD3-208ENST00000475912 ZNF468Q5VIY5 522 aaPredicted RBP9.45□□□□□ -0.9
PRKD3-208ENST00000475912 QTRT2Q9H974 415 aaKnown RBP9.45□□□□□ -0.9
PRKD3-208ENST00000475912 KLK14Q9P0G3 267 aa9.45□□□□□ -0.9
PRKD3-208ENST00000475912 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
PRKD3-208ENST00000475912 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
PRKD3-208ENST00000475912 ADH6P28332 368 aa9.44□□□□□ -0.9
PRKD3-208ENST00000475912 PCBP4P57723 403 aaKnown RBP9.44□□□□□ -0.9
PRKD3-208ENST00000475912 OCLNQ16625 522 aa9.44□□□□□ -0.9
PRKD3-208ENST00000475912 HIF1AQ16665 826 aa9.44□□□□□ -0.9
PRKD3-208ENST00000475912 BTLAQ7Z6A9 289 aa9.44□□□□□ -0.9
PRKD3-208ENST00000475912 FCHSD1Q86WN1 690 aa9.44□□□□□ -0.9
PRKD3-208ENST00000475912 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 EPXP11678 715 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 GSK3AP49840 483 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 KCNMA1Q12791 1236 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 DGKZQ13574 1117 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
PRKD3-208ENST00000475912 SLC30A3Q99726 388 aa9.43□□□□□ -0.9
PRKD3-208ENST00000475912 AVENQ9NQS1 362 aaPredicted RBP9.43□□□□□ -0.9
PRKD3-208ENST00000475912 TGFBR3LH3BV60 316 aa9.42□□□□□ -0.9
PRKD3-208ENST00000475912 AMPD1P23109 780 aa9.42□□□□□ -0.9
PRKD3-208ENST00000475912 IRS1P35568 1242 aa9.42□□□□□ -0.9
PRKD3-208ENST00000475912 RAB44Q7Z6P3 723 aaPredicted RBP9.42□□□□□ -0.9
PRKD3-208ENST00000475912 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
PRKD3-208ENST00000475912 KCNH4Q9UQ05 1017 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms