RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ARFGEF2Q9Y6D5 1785 aa9.67□□□□□ -0.86
UBE4B-208ENST00000475795 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
UBE4B-208ENST00000475795 RASSF7Q02833 373 aa9.66□□□□□ -0.86
UBE4B-208ENST00000475795 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
UBE4B-208ENST00000475795 FMNL2Q96PY5 1086 aa9.66□□□□□ -0.86
UBE4B-208ENST00000475795 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
UBE4B-208ENST00000475795 DLG5Q8TDM6 1919 aa9.66□□□□□ -0.86
UBE4B-208ENST00000475795 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-208ENST00000475795 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 TBC1D9BQ66K14 1250 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 BICDL1Q6ZP65 573 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 C2CD5Q86YS7 1000 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-208ENST00000475795 TTLL6Q8N841 843 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
UBE4B-208ENST00000475795 SLX4Q8IY92 1834 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 H0YIN7 160 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 LMNB1P20700 586 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 FSTL1Q12841 308 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 TBC1D2BQ9UPU7 963 aa9.64□□□□□ -0.87
UBE4B-208ENST00000475795 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-208ENST00000475795 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 KCNQ3O43525 872 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 A1BGP04217 495 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 PRELPP51888 382 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 PRR5LQ6MZQ0 368 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 DNAJC5GQ8N7S2 189 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 BRIP1Q9BX63 1249 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
UBE4B-208ENST00000475795 NFKBIEO00221 500 aa9.62□□□□□ -0.87
UBE4B-208ENST00000475795 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-208ENST00000475795 PDE6BP35913 854 aa9.62□□□□□ -0.87
UBE4B-208ENST00000475795 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
UBE4B-208ENST00000475795 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
UBE4B-208ENST00000475795 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
UBE4B-208ENST00000475795 GLTPD2A6NH11 291 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 MCM10Q7L590 875 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
UBE4B-208ENST00000475795 CCDC24Q8N4L8 307 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 CNBD1Q8NA66 436 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
UBE4B-208ENST00000475795 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.87
UBE4B-208ENST00000475795 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 NUP98P52948 1817 aa9.61□□□□□ -0.87
UBE4B-208ENST00000475795 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
UBE4B-208ENST00000475795 HTATSF1O43719 755 aaKnown RBP9.6□□□□□ -0.87
UBE4B-208ENST00000475795 SNRPA1P09661 255 aaKnown RBP9.6□□□□□ -0.87
UBE4B-208ENST00000475795 CD44P16070 742 aaKnown RBP9.6□□□□□ -0.87
UBE4B-208ENST00000475795 ST5P78524 1137 aa9.6□□□□□ -0.87
UBE4B-208ENST00000475795 NPHP1O15259 732 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 C21orf2O43822 256 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 VEGFAP15692 232 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-208ENST00000475795 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-208ENST00000475795 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-208ENST00000475795 HTRA3P83110 453 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 STYK1Q6J9G0 422 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-208ENST00000475795 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
UBE4B-208ENST00000475795 LTBP3Q9NS15 1303 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 RGL2O15211 777 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 SRGNP10124 158 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
UBE4B-208ENST00000475795 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-208ENST00000475795 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 TAOK3Q9H2K8 898 aa9.58□□□□□ -0.88
UBE4B-208ENST00000475795 SCN4AP35499 1836 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 POTECB2RU33 542 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 TAF7Q15545 349 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-208ENST00000475795 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 SOGA3Q5TF21 947 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 DPY19L2Q6NUT2 758 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 NBPF10Q6P3W6 841 aaKnown RBP9.57□□□□□ -0.88
UBE4B-208ENST00000475795 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
UBE4B-208ENST00000475795 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-208ENST00000475795 KLRG2A4D1S0 409 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-208ENST00000475795 NIP7Q9Y221 180 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBE4B-208ENST00000475795 NEFMP07197 916 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 NPR1P16066 1061 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
UBE4B-208ENST00000475795 C7orf43Q8WVR3 580 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
UBE4B-208ENST00000475795 HLFQ16534 295 aa9.54□□□□□ -0.88
UBE4B-208ENST00000475795 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
UBE4B-208ENST00000475795 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms