RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 CST9Q5W186 159 aa13.95□□□□□ -0.18
CCHCR1-212ENST00000475684 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-212ENST00000475684 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
CCHCR1-212ENST00000475684 TLL2Q9Y6L7 1015 aa13.95□□□□□ -0.18
CCHCR1-212ENST00000475684 CYP19A1P11511 503 aaPredicted RBP13.94□□□□□ -0.18
CCHCR1-212ENST00000475684 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
CCHCR1-212ENST00000475684 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
CCHCR1-212ENST00000475684 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
CCHCR1-212ENST00000475684 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 PRR5LQ6MZQ0 368 aa13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 TESK2Q96S53 571 aa13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 ANKRD31Q8N7Z5 1873 aa13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
CCHCR1-212ENST00000475684 CASP8AP2Q9UKL3 1982 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 TRAF5O00463 557 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 CCDC93Q567U6 631 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 C1orf141Q5JVX7 400 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 TBC1D9BQ66K14 1250 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 GPC2Q8N158 579 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 GCC1Q96CN9 775 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
CCHCR1-212ENST00000475684 NPHP1O15259 732 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 SRGNP10124 158 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 FKBP4Q02790 459 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 CIAPIN1Q6FI81 312 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 MASTLQ96GX5 879 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
CCHCR1-212ENST00000475684 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
CCHCR1-212ENST00000475684 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-212ENST00000475684 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-212ENST00000475684 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
CCHCR1-212ENST00000475684 FZD9O00144 591 aa13.89□□□□□ -0.19
CCHCR1-212ENST00000475684 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
CCHCR1-212ENST00000475684 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
CCHCR1-212ENST00000475684 GJA3Q9Y6H8 435 aa13.89□□□□□ -0.19
CCHCR1-212ENST00000475684 A0A087WZG4 1122 aa13.88□□□□□ -0.19
CCHCR1-212ENST00000475684 ST5P78524 1137 aa13.88□□□□□ -0.19
CCHCR1-212ENST00000475684 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
CCHCR1-212ENST00000475684 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
CCHCR1-212ENST00000475684 CACNA1SQ13698 1873 aa13.88□□□□□ -0.19
CCHCR1-212ENST00000475684 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-212ENST00000475684 HABP4Q5JVS0 413 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-212ENST00000475684 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
CCHCR1-212ENST00000475684 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
CCHCR1-212ENST00000475684 CELF2O95319 508 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 EPS15P42566 896 aa13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 JDP2Q8WYK2 163 aa13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
CCHCR1-212ENST00000475684 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
CCHCR1-212ENST00000475684 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-212ENST00000475684 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
CCHCR1-212ENST00000475684 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
CCHCR1-212ENST00000475684 ARFGEF2Q9Y6D5 1785 aa13.85□□□□□ -0.19
CCHCR1-212ENST00000475684 NOGQ13253 232 aa13.84□□□□□ -0.19
CCHCR1-212ENST00000475684 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
CCHCR1-212ENST00000475684 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
CCHCR1-212ENST00000475684 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
CCHCR1-212ENST00000475684 NPR1P16066 1061 aa13.83□□□□□ -0.2
CCHCR1-212ENST00000475684 SCNN1DP51172 638 aa13.83□□□□□ -0.2
CCHCR1-212ENST00000475684 ZNF408Q9H9D4 720 aa13.83□□□□□ -0.2
CCHCR1-212ENST00000475684 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-212ENST00000475684 STARD3NLO95772 234 aa13.82□□□□□ -0.2
CCHCR1-212ENST00000475684 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-212ENST00000475684 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
CCHCR1-212ENST00000475684 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
CCHCR1-212ENST00000475684 LGR6Q9HBX8 967 aa13.81□□□□□ -0.2
CCHCR1-212ENST00000475684 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
CCHCR1-212ENST00000475684 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 AEBP1Q8IUX7 1158 aa13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 HPS5Q9UPZ3 1129 aa13.8□□□□□ -0.2
CCHCR1-212ENST00000475684 TRPA1O75762 1119 aa13.79□□□□□ -0.2
CCHCR1-212ENST00000475684 ADARB2Q9NS39 739 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-212ENST00000475684 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
CCHCR1-212ENST00000475684 SCN11AQ9UI33 1791 aa13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 ALDH1B1P30837 517 aa13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 PSMD1Q99460 953 aa13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 RNF186Q9NXI6 227 aa13.78□□□□□ -0.2
CCHCR1-212ENST00000475684 HUNKP57058 714 aa13.77□□□□□ -0.21
CCHCR1-212ENST00000475684 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 KLRG2A4D1S0 409 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 RNMTO43148 476 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 KIF23Q02241 960 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms