RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
UBXN11-214ENST00000475591 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.33
UBXN11-214ENST00000475591 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-214ENST00000475591 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
UBXN11-214ENST00000475591 KLHDC4Q8TBB5 520 aa17.14■□□□□ 0.33
UBXN11-214ENST00000475591 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-214ENST00000475591 SGSM2O43147 1006 aa17.13■□□□□ 0.33
UBXN11-214ENST00000475591 NUCB2P80303 420 aa17.13■□□□□ 0.33
UBXN11-214ENST00000475591 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
UBXN11-214ENST00000475591 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
UBXN11-214ENST00000475591 CLASRPQ8N2M8 674 aaKnown RBP17.13■□□□□ 0.33
UBXN11-214ENST00000475591 MYD88Q99836 296 aa17.13■□□□□ 0.33
UBXN11-214ENST00000475591 SIL1Q9H173 461 aa17.13■□□□□ 0.33
UBXN11-214ENST00000475591 SASH1O94885 1247 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 ANAPC15P60006 121 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 GAS2L3Q86XJ1 694 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
UBXN11-214ENST00000475591 UTYO14607 1347 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 USP42Q9H9J4 1324 aaKnown RBP17.12■□□□□ 0.33
UBXN11-214ENST00000475591 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 HSPA4P34932 840 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 EPHA10Q5JZY3 1008 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 AACSQ86V21 672 aa17.12■□□□□ 0.33
UBXN11-214ENST00000475591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBXN11-214ENST00000475591 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
UBXN11-214ENST00000475591 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
UBXN11-214ENST00000475591 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
UBXN11-214ENST00000475591 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
UBXN11-214ENST00000475591 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
UBXN11-214ENST00000475591 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
UBXN11-214ENST00000475591 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
UBXN11-214ENST00000475591 CCDC8Q9H0W5 538 aaPredicted RBP17.11■□□□□ 0.33
UBXN11-214ENST00000475591 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
UBXN11-214ENST00000475591 RAD50Q92878 1312 aa17.1■□□□□ 0.33
UBXN11-214ENST00000475591 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
UBXN11-214ENST00000475591 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
UBXN11-214ENST00000475591 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
UBXN11-214ENST00000475591 ECHDC1Q9NTX5 307 aa17.1■□□□□ 0.33
UBXN11-214ENST00000475591 SKOR2Q2VWA4 1001 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-214ENST00000475591 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-214ENST00000475591 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
UBXN11-214ENST00000475591 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
UBXN11-214ENST00000475591 GCKRQ14397 625 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 CABP4P57796 275 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-214ENST00000475591 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
UBXN11-214ENST00000475591 CUL4AQ13619 759 aa17.08■□□□□ 0.33
UBXN11-214ENST00000475591 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.33
UBXN11-214ENST00000475591 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.33
UBXN11-214ENST00000475591 MRC1P22897 1456 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
UBXN11-214ENST00000475591 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBXN11-214ENST00000475591 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
UBXN11-214ENST00000475591 MCM2P49736 904 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 PTH1RQ03431 593 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 CPA1P15085 419 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 PTMSP20962 102 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
UBXN11-214ENST00000475591 CPDO75976 1380 aa17.07■□□□□ 0.32
UBXN11-214ENST00000475591 MRE11P49959 708 aa17.06■□□□□ 0.32
UBXN11-214ENST00000475591 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
UBXN11-214ENST00000475591 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
UBXN11-214ENST00000475591 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
UBXN11-214ENST00000475591 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
UBXN11-214ENST00000475591 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 ABCC6O95255 1503 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 GLI3P10071 1580 aa17.05■□□□□ 0.32
UBXN11-214ENST00000475591 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
UBXN11-214ENST00000475591 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
UBXN11-214ENST00000475591 DTNBO60941 627 aa17.04■□□□□ 0.32
UBXN11-214ENST00000475591 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 AK2P54819 239 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
UBXN11-214ENST00000475591 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 EVI5LQ96CN4 794 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 TTC14Q96N46 770 aa17.03■□□□□ 0.32
UBXN11-214ENST00000475591 BRD1O95696 1058 aa17.02■□□□□ 0.32
UBXN11-214ENST00000475591 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
UBXN11-214ENST00000475591 GPT2Q8TD30 523 aa17.02■□□□□ 0.32
UBXN11-214ENST00000475591 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.32
UBXN11-214ENST00000475591 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms