RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 EAPPQ56P03 285 aaPredicted RBP20.7■□□□□ 0.9
NME1-206ENST00000475573 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
NME1-206ENST00000475573 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
NME1-206ENST00000475573 HEG1Q9ULI3 1381 aa20.7■□□□□ 0.9
NME1-206ENST00000475573 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
NME1-206ENST00000475573 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
NME1-206ENST00000475573 HACL1Q9UJ83 578 aa20.69■□□□□ 0.9
NME1-206ENST00000475573 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
NME1-206ENST00000475573 HMOX1P09601 288 aa20.68■□□□□ 0.9
NME1-206ENST00000475573 MAP2K1Q02750 393 aaPredicted RBP20.68■□□□□ 0.9
NME1-206ENST00000475573 CAMTA2O94983 1202 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 EPHX2P34913 555 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 DEFB115Q30KQ5 88 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
NME1-206ENST00000475573 C7orf43Q8WVR3 580 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
NME1-206ENST00000475573 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 CLEC11AQ9Y240 323 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 THSD7BQ9C0I4 1608 aa20.67■□□□□ 0.9
NME1-206ENST00000475573 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
NME1-206ENST00000475573 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
NME1-206ENST00000475573 PNMA8AQ86V59 439 aaPredicted RBP20.66■□□□□ 0.9
NME1-206ENST00000475573 WDR33Q9C0J8 1336 aaKnown RBP20.65■□□□□ 0.9
NME1-206ENST00000475573 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
NME1-206ENST00000475573 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
NME1-206ENST00000475573 CNTROBQ8N137 903 aa20.64■□□□□ 0.89
NME1-206ENST00000475573 NPR1P16066 1061 aa20.63■□□□□ 0.89
NME1-206ENST00000475573 TEFQ10587 303 aa20.63■□□□□ 0.89
NME1-206ENST00000475573 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
NME1-206ENST00000475573 ABT1Q9ULW3 272 aaKnown RBP20.63■□□□□ 0.89
NME1-206ENST00000475573 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
NME1-206ENST00000475573 MAP1SQ66K74 1059 aaPredicted RBP20.62■□□□□ 0.89
NME1-206ENST00000475573 A1BGP04217 495 aa20.61■□□□□ 0.89
NME1-206ENST00000475573 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.89
NME1-206ENST00000475573 MLLT1Q03111 559 aaPredicted RBP20.61■□□□□ 0.89
NME1-206ENST00000475573 NBPF5PQ86XG9 351 aaPredicted RBP20.61■□□□□ 0.89
NME1-206ENST00000475573 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
NME1-206ENST00000475573 RTKN2Q8IZC4 609 aa20.61■□□□□ 0.89
NME1-206ENST00000475573 FMNL2Q96PY5 1086 aa20.61■□□□□ 0.89
NME1-206ENST00000475573 PCDH10Q9P2E7 1040 aa20.61■□□□□ 0.89
NME1-206ENST00000475573 FZD9O00144 591 aa20.6■□□□□ 0.89
NME1-206ENST00000475573 KLRG2A4D1S0 409 aaPredicted RBP20.59■□□□□ 0.89
NME1-206ENST00000475573 RGS19P49795 217 aa20.59■□□□□ 0.89
NME1-206ENST00000475573 AMER1Q5JTC6 1135 aaPredicted RBP20.59■□□□□ 0.89
NME1-206ENST00000475573 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
NME1-206ENST00000475573 GPC2Q8N158 579 aa20.59■□□□□ 0.89
NME1-206ENST00000475573 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
NME1-206ENST00000475573 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
NME1-206ENST00000475573 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
NME1-206ENST00000475573 IARSP41252 1262 aaKnown RBP20.58■□□□□ 0.89
NME1-206ENST00000475573 IL17REQ8NFR9 667 aa20.58■□□□□ 0.89
NME1-206ENST00000475573 BEGAINQ9BUH8 593 aa20.58■□□□□ 0.89
NME1-206ENST00000475573 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
NME1-206ENST00000475573 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
NME1-206ENST00000475573 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
NME1-206ENST00000475573 ECE1P42892 770 aa20.57■□□□□ 0.88
NME1-206ENST00000475573 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
NME1-206ENST00000475573 TRPM7Q96QT4 1865 aa20.57■□□□□ 0.88
NME1-206ENST00000475573 OLFM4Q6UX06 510 aa20.56■□□□□ 0.88
NME1-206ENST00000475573 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
NME1-206ENST00000475573 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
NME1-206ENST00000475573 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
NME1-206ENST00000475573 SNED1Q8TER0 1413 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 LTBP1Q14766 1721 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 RGL2O15211 777 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 TPTE2Q6XPS3 522 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 JDP2Q8WYK2 163 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 PSMD1Q99460 953 aa20.54■□□□□ 0.88
NME1-206ENST00000475573 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
NME1-206ENST00000475573 ALDH1B1P30837 517 aa20.53■□□□□ 0.88
NME1-206ENST00000475573 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
NME1-206ENST00000475573 GPR101Q96P66 508 aaPredicted RBP20.53■□□□□ 0.88
NME1-206ENST00000475573 EIF6P56537 245 aaKnown RBP20.52■□□□□ 0.88
NME1-206ENST00000475573 COL3A1P02461 1466 aaPredicted RBP20.51■□□□□ 0.87
NME1-206ENST00000475573 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
NME1-206ENST00000475573 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
NME1-206ENST00000475573 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
NME1-206ENST00000475573 NIP7Q9Y221 180 aaKnown RBP eCLIP20.51■□□□□ 0.87
NME1-206ENST00000475573 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
NME1-206ENST00000475573 GJA3Q9Y6H8 435 aa20.5■□□□□ 0.87
NME1-206ENST00000475573 COL4A5P29400 1685 aa20.5■□□□□ 0.87
NME1-206ENST00000475573 KCNQ3O43525 872 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 MAP2K2P36507 400 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 SCNN1DP51172 638 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 GRM1Q13255 1194 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
NME1-206ENST00000475573 CA12O43570 354 aa20.48■□□□□ 0.87
NME1-206ENST00000475573 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
NME1-206ENST00000475573 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
NME1-206ENST00000475573 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
NME1-206ENST00000475573 PDE4DIPQ5VU43 2346 aa20.47■□□□□ 0.87
NME1-206ENST00000475573 CRY2Q49AN0 593 aa20.47■□□□□ 0.87
NME1-206ENST00000475573 CST9Q5W186 159 aa20.47■□□□□ 0.87
NME1-206ENST00000475573 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
NME1-206ENST00000475573 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
NME1-206ENST00000475573 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
NME1-206ENST00000475573 EPS15P42566 896 aa20.46■□□□□ 0.87
NME1-206ENST00000475573 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms