RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L21D6R901 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 GDF11O95390 407 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 C1orf53Q5VUE5 145 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 ANKMY2Q8IV38 441 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 RHPN1Q8TCX5 695 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 EDARADDQ8WWZ3 215 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 PHACTR1Q9C0D0 580 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
PDE6C-202ENST00000475427 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
PDE6C-202ENST00000475427 SHISA8B8ZZ34 492 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 EFSO43281 561 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 ARAFP10398 606 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
PDE6C-202ENST00000475427 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
PDE6C-202ENST00000475427 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
PDE6C-202ENST00000475427 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
PDE6C-202ENST00000475427 SLCO4C1Q6ZQN7 724 aa8.65□□□□□ -1.02
PDE6C-202ENST00000475427 STAG2Q8N3U4 1231 aa8.65□□□□□ -1.02
PDE6C-202ENST00000475427 C2orf49Q9BVC5 232 aaPredicted RBP8.65□□□□□ -1.02
PDE6C-202ENST00000475427 STRN4Q9NRL3 753 aa8.65□□□□□ -1.02
PDE6C-202ENST00000475427 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
PDE6C-202ENST00000475427 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
PDE6C-202ENST00000475427 PHF20L1A8MW92 1017 aa8.64□□□□□ -1.03
PDE6C-202ENST00000475427 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
PDE6C-202ENST00000475427 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
PDE6C-202ENST00000475427 ARXQ96QS3 562 aa8.64□□□□□ -1.03
PDE6C-202ENST00000475427 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
PDE6C-202ENST00000475427 LGR5O75473 907 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 RFX1P22670 979 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 CDCA8Q53HL2 280 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 ALDH16A1Q8IZ83 802 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
PDE6C-202ENST00000475427 ANKIB1Q9P2G1 1089 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 KLF15Q9UIH9 416 aa8.63□□□□□ -1.03
PDE6C-202ENST00000475427 EPXP11678 715 aa8.62□□□□□ -1.03
PDE6C-202ENST00000475427 ADH6P28332 368 aa8.62□□□□□ -1.03
PDE6C-202ENST00000475427 SNRPNP63162 240 aaKnown RBP8.62□□□□□ -1.03
PDE6C-202ENST00000475427 HSH2DQ96JZ2 352 aa8.62□□□□□ -1.03
PDE6C-202ENST00000475427 PRR12Q9ULL5 1215 aa8.62□□□□□ -1.03
PDE6C-202ENST00000475427 IGFBP4P22692 258 aa8.61□□□□□ -1.03
PDE6C-202ENST00000475427 AMPD1P23109 780 aa8.61□□□□□ -1.03
PDE6C-202ENST00000475427 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
PDE6C-202ENST00000475427 ZNF468Q5VIY5 522 aaPredicted RBP8.61□□□□□ -1.03
PDE6C-202ENST00000475427 BTBD6Q96KE9 485 aa8.61□□□□□ -1.03
PDE6C-202ENST00000475427 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
PDE6C-202ENST00000475427 RRAGCQ9HB90 399 aa8.61□□□□□ -1.03
PDE6C-202ENST00000475427 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
PDE6C-202ENST00000475427 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
PDE6C-202ENST00000475427 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
PDE6C-202ENST00000475427 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
PDE6C-202ENST00000475427 CEP63Q96MT8 703 aa8.6□□□□□ -1.03
PDE6C-202ENST00000475427 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
PDE6C-202ENST00000475427 GRIN2CQ14957 1233 aa8.59□□□□□ -1.03
PDE6C-202ENST00000475427 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
PDE6C-202ENST00000475427 MKL2Q9ULH7 1088 aa8.59□□□□□ -1.03
PDE6C-202ENST00000475427 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
PDE6C-202ENST00000475427 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
PDE6C-202ENST00000475427 WEE1P30291 646 aa8.57□□□□□ -1.04
PDE6C-202ENST00000475427 HIF1AQ16665 826 aa8.57□□□□□ -1.04
PDE6C-202ENST00000475427 SYT9Q86SS6 491 aa8.57□□□□□ -1.04
PDE6C-202ENST00000475427 KCNQ4P56696 695 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 TYRO3Q06418 890 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 RTN1Q16799 776 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 LINC00114Q6XXX2 140 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 SLC30A3Q99726 388 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
PDE6C-202ENST00000475427 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
PDE6C-202ENST00000475427 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
PDE6C-202ENST00000475427 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
PDE6C-202ENST00000475427 FOXO3O43524 673 aa8.54□□□□□ -1.04
PDE6C-202ENST00000475427 SIN3BO75182 1162 aa8.54□□□□□ -1.04
PDE6C-202ENST00000475427 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
PDE6C-202ENST00000475427 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
PDE6C-202ENST00000475427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ELOA3DA6NLF2 546 aaPredicted RBP8.53□□□□□ -1.04
PDE6C-202ENST00000475427 DGKGP49619 791 aa8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ELOA3BQ3SY89 546 aa8.53□□□□□ -1.04
PDE6C-202ENST00000475427 IER5Q5VY09 327 aa8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ELOA3Q8NG57 546 aa8.53□□□□□ -1.04
PDE6C-202ENST00000475427 ALAS2P22557 587 aa8.52□□□□□ -1.05
PDE6C-202ENST00000475427 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
PDE6C-202ENST00000475427 VTI1AQ96AJ9 217 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms