RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 SNX14Q9Y5W7 946 aa13.91□□□□□ -0.18
FXR1-211ENST00000475315 SETD1AO15047 1707 aaKnown RBP13.91□□□□□ -0.18
FXR1-211ENST00000475315 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 NPHP1O15259 732 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 HMMRO75330 724 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 GJB2P29033 226 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 ZNF165P49910 485 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 TPM4P67936 248 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 FRMPD1Q5SYB0 1578 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 CLSTN2Q9H4D0 955 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 DACT1Q9NYF0 836 aa13.9□□□□□ -0.18
FXR1-211ENST00000475315 PSEN1P49768 467 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 IQCB1Q15051 598 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 RILPL2Q969X0 211 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
FXR1-211ENST00000475315 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
FXR1-211ENST00000475315 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 LRRFIP2Q9Y608 721 aaKnown RBP13.89□□□□□ -0.19
FXR1-211ENST00000475315 ZSCAN26Q16670 478 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 ICE2Q659A1 982 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 C10orf67Q8IYJ2 551 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 DNAJC25Q9H1X3 360 aa13.89□□□□□ -0.19
FXR1-211ENST00000475315 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
FXR1-211ENST00000475315 MAP2P11137 1827 aaKnown RBP13.88□□□□□ -0.19
FXR1-211ENST00000475315 ABCC3O15438 1527 aa13.88□□□□□ -0.19
FXR1-211ENST00000475315 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
FXR1-211ENST00000475315 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
FXR1-211ENST00000475315 GYS2P54840 703 aa13.88□□□□□ -0.19
FXR1-211ENST00000475315 ST3GAL1Q11201 340 aa13.88□□□□□ -0.19
FXR1-211ENST00000475315 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
FXR1-211ENST00000475315 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
FXR1-211ENST00000475315 KRT85P78386 507 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 ARHGAP29Q52LW3 1261 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 EFCAB2Q5VUJ9 269 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 SRLQ86TD4 932 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
FXR1-211ENST00000475315 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 CHMP3Q9Y3E7 222 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
FXR1-211ENST00000475315 CAVIN2O95810 425 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 REXO1L1PQ8IX06 675 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 HYPKQ9NX55 129 aa13.87□□□□□ -0.19
FXR1-211ENST00000475315 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
FXR1-211ENST00000475315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.87□□□□□ -0.194e-17■□□□□ 10.7
FXR1-211ENST00000475315 CLTCQ00610 1675 aaKnown RBP13.87□□□□□ -0.19
FXR1-211ENST00000475315 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 HMOX1P09601 288 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 MLECQ14165 292 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 FILIP1Q7Z7B0 1213 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 CCDC83Q8IWF9 413 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
FXR1-211ENST00000475315 FBLN2P98095 1184 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
FXR1-211ENST00000475315 DTNBO60941 627 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 LSG1Q9H089 658 aaKnown RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 AOX1Q06278 1338 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 SGSM2O43147 1006 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 GUCY2CP25092 1073 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 GOLGA5Q8TBA6 731 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
FXR1-211ENST00000475315 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
FXR1-211ENST00000475315 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
FXR1-211ENST00000475315 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 SASH3O75995 380 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 OAS2P29728 719 aaKnown RBP13.84□□□□□ -0.19
FXR1-211ENST00000475315 GPS2Q13227 327 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 CWC15Q9P013 229 aaKnown RBP13.84□□□□□ -0.19
FXR1-211ENST00000475315 RRP15Q9Y3B9 282 aaKnown RBP13.84□□□□□ -0.19
FXR1-211ENST00000475315 CRYBG1Q9Y4K1 1723 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 NR1I2O75469 434 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 TBC1D8O95759 1140 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 LMOD3Q0VAK6 560 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
FXR1-211ENST00000475315 ARGLU1Q9NWB6 273 aaPredicted RBP13.84□□□□□ -0.19
FXR1-211ENST00000475315 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
FXR1-211ENST00000475315 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms