RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 KCNQ3O43525 872 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 DMTNQ08495 405 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 LARP1BQ659C4 914 aaKnown RBP16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 A0A087WWV3 80 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 FAM227BQ96M60 508 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
SEMA4D-217ENST00000475255 FOSBP53539 338 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 CEP170BQ9Y4F5 1589 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 LETM1O95202 739 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 KIF1BPQ96EK5 621 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 CHPF2Q9P2E5 772 aa16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
SEMA4D-217ENST00000475255 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 ATP6V1DQ9Y5K8 247 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 TYRO3Q06418 890 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 ZNF592Q92610 1267 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 NEO1Q92859 1461 aa16.35■□□□□ 0.21
SEMA4D-217ENST00000475255 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 NLRP6P59044 892 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
SEMA4D-217ENST00000475255 C3P01024 1663 aa16.33■□□□□ 0.21
SEMA4D-217ENST00000475255 FBXW7Q969H0 707 aa16.33■□□□□ 0.21
SEMA4D-217ENST00000475255 CBX8Q9HC52 389 aa16.33■□□□□ 0.21
SEMA4D-217ENST00000475255 POLA2Q14181 598 aa16.33■□□□□ 0.2
SEMA4D-217ENST00000475255 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
SEMA4D-217ENST00000475255 CCDC8Q9H0W5 538 aaPredicted RBP16.33■□□□□ 0.2
SEMA4D-217ENST00000475255 GOLGA6L4A6NEF3 574 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 ARID5BQ14865 1188 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 V9GYY5 206 aaPredicted RBP16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 DNAJC25Q9H1X3 360 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
SEMA4D-217ENST00000475255 USP6P35125 1406 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 AACSQ86V21 672 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 EDC3Q96F86 508 aaKnown RBP16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 SIL1Q9H173 461 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 CHGBP05060 677 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 KRT85P78386 507 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 AOX1Q06278 1338 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
SEMA4D-217ENST00000475255 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 CWF19L2Q2TBE0 894 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 CREB3L3Q68CJ9 461 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 NDUFB9Q9Y6M9 179 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 GOLGA6L6A8MZA4 724 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 JAK2O60674 1132 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 DNAAF4Q8WXU2 420 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 BOLA2Q9H3K6 86 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 ZSWIM6Q9HCJ5 1215 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 NR1I2O75469 434 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 FAM69CQ0P6D2 419 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 KLHDC4Q8TBB5 520 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
SEMA4D-217ENST00000475255 FLT4P35916 1363 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 CCDC144BQ3MJ40 725 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 SETD1AO15047 1707 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 TNNT1P13805 278 aa16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-217ENST00000475255 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms