RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
EPCAM-205ENST00000474691 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 CHADLQ6NUI6 762 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
EPCAM-205ENST00000474691 KCNQ3O43525 872 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 HSPA1AP0DMV8 641 aaKnown RBP18.39■□□□□ 0.53
EPCAM-205ENST00000474691 HSPA1BP0DMV9 641 aaKnown RBP18.39■□□□□ 0.53
EPCAM-205ENST00000474691 SRGNP10124 158 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
EPCAM-205ENST00000474691 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 LTBP3Q9NS15 1303 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 DLEC1Q9Y238 1755 aa18.39■□□□□ 0.53
EPCAM-205ENST00000474691 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
EPCAM-205ENST00000474691 DDNO94850 711 aaPredicted RBP18.38■□□□□ 0.53
EPCAM-205ENST00000474691 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
EPCAM-205ENST00000474691 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
EPCAM-205ENST00000474691 NPR1P16066 1061 aa18.37■□□□□ 0.53
EPCAM-205ENST00000474691 MCM10Q7L590 875 aa18.37■□□□□ 0.53
EPCAM-205ENST00000474691 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
EPCAM-205ENST00000474691 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
EPCAM-205ENST00000474691 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
EPCAM-205ENST00000474691 CREBZFQ9NS37 354 aa18.36■□□□□ 0.53
EPCAM-205ENST00000474691 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 POTECB2RU33 542 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 ALDH1B1P30837 517 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 RTKN2Q8IZC4 609 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
EPCAM-205ENST00000474691 EAPPQ56P03 285 aaPredicted RBP18.34■□□□□ 0.53
EPCAM-205ENST00000474691 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
EPCAM-205ENST00000474691 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
EPCAM-205ENST00000474691 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.52
EPCAM-205ENST00000474691 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
EPCAM-205ENST00000474691 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
EPCAM-205ENST00000474691 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
EPCAM-205ENST00000474691 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
EPCAM-205ENST00000474691 NGEFQ8N5V2 710 aa18.32■□□□□ 0.52
EPCAM-205ENST00000474691 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
EPCAM-205ENST00000474691 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
EPCAM-205ENST00000474691 JDP2Q8WYK2 163 aa18.31■□□□□ 0.52
EPCAM-205ENST00000474691 AIDAQ96BJ3 306 aa18.31■□□□□ 0.52
EPCAM-205ENST00000474691 NYXQ9GZU5 481 aa18.31■□□□□ 0.52
EPCAM-205ENST00000474691 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
EPCAM-205ENST00000474691 HACL1Q9UJ83 578 aa18.31■□□□□ 0.52
EPCAM-205ENST00000474691 RGL2O15211 777 aa18.3■□□□□ 0.52
EPCAM-205ENST00000474691 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
EPCAM-205ENST00000474691 KIF6Q6ZMV9 814 aa18.3■□□□□ 0.52
EPCAM-205ENST00000474691 TMX4Q9H1E5 349 aaPredicted RBP18.3■□□□□ 0.52
EPCAM-205ENST00000474691 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
EPCAM-205ENST00000474691 POTEJP0CG39 1038 aa18.29■□□□□ 0.52
EPCAM-205ENST00000474691 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
EPCAM-205ENST00000474691 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
EPCAM-205ENST00000474691 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
EPCAM-205ENST00000474691 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
EPCAM-205ENST00000474691 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
EPCAM-205ENST00000474691 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
EPCAM-205ENST00000474691 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
EPCAM-205ENST00000474691 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
EPCAM-205ENST00000474691 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
EPCAM-205ENST00000474691 TMEM88BA6NKF7 163 aa18.27■□□□□ 0.52
EPCAM-205ENST00000474691 EIF6P56537 245 aaKnown RBP18.27■□□□□ 0.52
EPCAM-205ENST00000474691 SYNE4Q8N205 404 aa18.27■□□□□ 0.52
EPCAM-205ENST00000474691 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
EPCAM-205ENST00000474691 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
EPCAM-205ENST00000474691 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.52
EPCAM-205ENST00000474691 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.51
EPCAM-205ENST00000474691 KLRG2A4D1S0 409 aaPredicted RBP18.26■□□□□ 0.51
EPCAM-205ENST00000474691 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
EPCAM-205ENST00000474691 EPHX2P34913 555 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 HLFQ16534 295 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
EPCAM-205ENST00000474691 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 C7orf43Q8WVR3 580 aa18.26■□□□□ 0.51
EPCAM-205ENST00000474691 CACNA1SQ13698 1873 aa18.25■□□□□ 0.51
EPCAM-205ENST00000474691 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
EPCAM-205ENST00000474691 BCORQ6W2J9 1755 aa18.25■□□□□ 0.51
EPCAM-205ENST00000474691 ZNF541Q9H0D2 1346 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 MYL6BP14649 208 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 OLFM4Q6UX06 510 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 GJA3Q9Y6H8 435 aa18.24■□□□□ 0.51
EPCAM-205ENST00000474691 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
EPCAM-205ENST00000474691 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
EPCAM-205ENST00000474691 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
EPCAM-205ENST00000474691 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
EPCAM-205ENST00000474691 GPC2Q8N158 579 aa18.23■□□□□ 0.51
EPCAM-205ENST00000474691 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
EPCAM-205ENST00000474691 GPTP24298 496 aa18.22■□□□□ 0.51
EPCAM-205ENST00000474691 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
EPCAM-205ENST00000474691 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
EPCAM-205ENST00000474691 PSMD1Q99460 953 aa18.22■□□□□ 0.51
EPCAM-205ENST00000474691 ABT1Q9ULW3 272 aaKnown RBP18.22■□□□□ 0.51
EPCAM-205ENST00000474691 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms