RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
NPAS2-208ENST00000474550 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
NPAS2-208ENST00000474550 MARCH6O60337 910 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 FLT4P35916 1363 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 NEO1Q92859 1461 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 MSH6P52701 1360 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 ABCC4O15439 1325 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.47
NPAS2-208ENST00000474550 ZNF165P49910 485 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 QRICH2Q9H0J4 1663 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 MCM10Q7L590 875 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 CCDC148Q8NFR7 591 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 MYO1BO43795 1136 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 IQGAP1P46940 1657 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 SMARCA5O60264 1052 aaPredicted RBP12.08□□□□□ -0.48
NPAS2-208ENST00000474550 SEC24BO95487 1268 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
NPAS2-208ENST00000474550 CEP135Q66GS9 1140 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
NPAS2-208ENST00000474550 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
NPAS2-208ENST00000474550 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
NPAS2-208ENST00000474550 KDM4AO75164 1064 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 KIF20AO95235 890 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 EMILIN1Q9Y6C2 1016 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
NPAS2-208ENST00000474550 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
NPAS2-208ENST00000474550 NME9Q86XW9 330 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 KIF5CO60282 957 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 CASQ1P31415 396 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
NPAS2-208ENST00000474550 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 MED14O60244 1454 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 PIBF1Q8WXW3 757 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 POLKQ9UBT6 870 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 ARHGAP31Q2M1Z3 1444 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 ARHGEF10O15013 1369 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 CCDC57Q2TAC2 916 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 BMP15O95972 392 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
NPAS2-208ENST00000474550 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 MYRIPQ8NFW9 859 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 GOLGA6L10A6NI86 522 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 TOP1P11387 765 aaKnown RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 SNW1Q13573 536 aaKnown RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 ZFYP08048 801 aaPredicted RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 ERLIN2O94905 339 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 TUBB2AQ13885 445 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 LLPHQ9BRT6 129 aaKnown RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 TUBB2BQ9BVA1 445 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 CFAP100Q494V2 611 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 ANTXR1Q9H6X2 564 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
NPAS2-208ENST00000474550 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
NPAS2-208ENST00000474550 TTF1Q15361 905 aaPredicted RBP12.04□□□□□ -0.48
NPAS2-208ENST00000474550 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 ATF3P18847 181 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 CHMLP26374 656 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 ZNF397Q8NF99 534 aaPredicted RBP12.04□□□□□ -0.48
NPAS2-208ENST00000474550 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
NPAS2-208ENST00000474550 KIAA0754O94854 1291 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 STK3Q13188 491 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 CTAGE1Q96RT6 745 aa12.04□□□□□ -0.48
NPAS2-208ENST00000474550 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
NPAS2-208ENST00000474550 EVA1CP58658 441 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 ARHGAP29Q52LW3 1261 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 IVLP07476 585 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 TM6SF1Q9BZW5 370 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
NPAS2-208ENST00000474550 NLRP2Q9NX02 1062 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
NPAS2-208ENST00000474550 GABPB1Q06547 395 aaPredicted RBP12.03□□□□□ -0.48
NPAS2-208ENST00000474550 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
NPAS2-208ENST00000474550 EPS15P42566 896 aa12.02□□□□□ -0.48
NPAS2-208ENST00000474550 MEIS3Q99687 375 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms