RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
CCDC93-208ENST00000474546 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
CCDC93-208ENST00000474546 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
CCDC93-208ENST00000474546 ITSN1Q15811 1721 aa9.65□□□□□ -0.86
CCDC93-208ENST00000474546 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.86
CCDC93-208ENST00000474546 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
CCDC93-208ENST00000474546 DMTNQ08495 405 aa9.65□□□□□ -0.86
CCDC93-208ENST00000474546 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
CCDC93-208ENST00000474546 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
CCDC93-208ENST00000474546 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.87
CCDC93-208ENST00000474546 CD163L1Q9NR16 1453 aa9.65□□□□□ -0.87
CCDC93-208ENST00000474546 ABCA3Q99758 1704 aa9.65□□□□□ -0.87
CCDC93-208ENST00000474546 HTATSF1O43719 755 aaKnown RBP9.64□□□□□ -0.87
CCDC93-208ENST00000474546 GNAI3P08754 354 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 GSPT1P15170 499 aaKnown RBP9.64□□□□□ -0.87
CCDC93-208ENST00000474546 SDSP20132 328 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 UBE2HP62256 183 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 PXDNLA1KZ92 1463 aa9.64□□□□□ -0.87
CCDC93-208ENST00000474546 CACNA1FO60840 1977 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 SYCE3A1L190 88 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 TUBB4AP04350 444 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 MX1P20591 662 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
CCDC93-208ENST00000474546 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 ZSCAN31Q96LW9 406 aaPredicted RBP9.63□□□□□ -0.87
CCDC93-208ENST00000474546 BABAM1Q9NWV8 329 aa9.63□□□□□ -0.87
CCDC93-208ENST00000474546 SPATA31A1Q5TZJ5 1347 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 CCDC171Q6TFL3 1326 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 SBF2Q86WG5 1849 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 NEMFO60524 1076 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
CCDC93-208ENST00000474546 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC93-208ENST00000474546 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 CEP85Q6P2H3 762 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.62□□□□□ -0.87
CCDC93-208ENST00000474546 PROM2Q8N271 834 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 TMX3Q96JJ7 454 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
CCDC93-208ENST00000474546 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 TMEM63CQ9P1W3 806 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 PAXBP1Q9Y5B6 917 aa9.62□□□□□ -0.87
CCDC93-208ENST00000474546 N4BP2Q86UW6 1770 aaPredicted RBP9.61□□□□□ -0.87
CCDC93-208ENST00000474546 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 PDCP20941 246 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 NEK4P51957 841 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 HSP90AB4PQ58FF6 505 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 SIRT2Q8IXJ6 389 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 CHMP4CQ96CF2 233 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
CCDC93-208ENST00000474546 STAP2Q9UGK3 403 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 TOPAZ1Q8N9V7 1692 aa9.61□□□□□ -0.87
CCDC93-208ENST00000474546 TTC21BQ7Z4L5 1316 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 KIF2AO00139 706 aaPredicted RBP9.6□□□□□ -0.87
CCDC93-208ENST00000474546 GNAI2P04899 355 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 CCDC192P0DO97 292 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 GABPB1Q06547 395 aaPredicted RBP9.6□□□□□ -0.87
CCDC93-208ENST00000474546 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 LRRCC1Q9C099 1032 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 NMRK2Q9NPI5 230 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 FOXD4L1Q9NU39 408 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 POLKQ9UBT6 870 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 PRDM4Q9UKN5 801 aa9.6□□□□□ -0.87
CCDC93-208ENST00000474546 A0A0C4DFX4 3053 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 MON2Q7Z3U7 1717 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.87
CCDC93-208ENST00000474546 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 IL13P35225 146 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 PDE1AP54750 535 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 BARGINQ6ZT62 677 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 RTF1Q92541 710 aaKnown RBP9.59□□□□□ -0.87
CCDC93-208ENST00000474546 COG3Q96JB2 828 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 CGNQ9P2M7 1197 aaKnown RBP9.59□□□□□ -0.87
CCDC93-208ENST00000474546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCDC93-208ENST00000474546 KNDC1Q76NI1 1749 aa9.59□□□□□ -0.87
CCDC93-208ENST00000474546 CHL1O00533 1208 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 KDM4AO75164 1064 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 LBX1P52954 281 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
CCDC93-208ENST00000474546 TXNRD1Q16881 649 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
CCDC93-208ENST00000474546 ZDHHC9Q9Y397 364 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 CUL9Q8IWT3 2517 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 DLG5Q8TDM6 1919 aa9.58□□□□□ -0.88
CCDC93-208ENST00000474546 ELP1O95163 1332 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 TNS3Q68CZ2 1445 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 HIP1O00291 1037 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 NRDCO43847 1150 aa9.57□□□□□ -0.88
CCDC93-208ENST00000474546 ZSCAN22P10073 491 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms