RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 RAD21O60216 631 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 XP32Q5T750 250 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 SLC30A3Q99726 388 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 TSPAN10Q9H1Z9 355 aaPredicted RBP8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 AVENQ9NQS1 362 aaPredicted RBP8.11□□□□□ -1.11
TMEM50B-208ENST00000474272 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
TMEM50B-208ENST00000474272 PIK3R2O00459 728 aa8.09□□□□□ -1.11
TMEM50B-208ENST00000474272 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.11
TMEM50B-208ENST00000474272 HSH2DQ96JZ2 352 aa8.09□□□□□ -1.11
TMEM50B-208ENST00000474272 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
TMEM50B-208ENST00000474272 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 ELOA3DA6NLF2 546 aaPredicted RBP8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 LAMC2Q13753 1193 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 DOC2BQ14184 412 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 ELOA3BQ3SY89 546 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 C8orf86Q6ZUL3 223 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 ELOA3Q8NG57 546 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
TMEM50B-208ENST00000474272 SFI1A8K8P3 1242 aa8.07□□□□□ -1.12
TMEM50B-208ENST00000474272 OGFOD1Q8N543 542 aa8.07□□□□□ -1.12
TMEM50B-208ENST00000474272 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
TMEM50B-208ENST00000474272 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
TMEM50B-208ENST00000474272 ZNF594Q96JF6 807 aaPredicted RBP8.07□□□□□ -1.12
TMEM50B-208ENST00000474272 FAM229AH3BQW9 127 aa8.06□□□□□ -1.12
TMEM50B-208ENST00000474272 LGR5O75473 907 aa8.06□□□□□ -1.12
TMEM50B-208ENST00000474272 ALAS2P22557 587 aa8.06□□□□□ -1.12
TMEM50B-208ENST00000474272 CEP63Q96MT8 703 aa8.06□□□□□ -1.12
TMEM50B-208ENST00000474272 PHACTR1Q9C0D0 580 aa8.06□□□□□ -1.12
TMEM50B-208ENST00000474272 ATP9BO43861 1147 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 SPEM2Q0P670 501 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 MDFIQ99750 246 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
TMEM50B-208ENST00000474272 M0R082 166 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 SIN3BO75182 1162 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 ITGB7P26010 798 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 ZNF417Q8TAU3 575 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 ZNF587Q96SQ5 575 aaPredicted RBP8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 BRD7Q9NPI1 651 aa8.04□□□□□ -1.12
TMEM50B-208ENST00000474272 C21orf2O43822 256 aa8.03□□□□□ -1.12
TMEM50B-208ENST00000474272 PPP1R12BO60237 982 aaPredicted RBP8.03□□□□□ -1.12
TMEM50B-208ENST00000474272 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
TMEM50B-208ENST00000474272 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
TMEM50B-208ENST00000474272 SEMA6BQ9H3T3 888 aa8.03□□□□□ -1.12
TMEM50B-208ENST00000474272 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 ADARB2-AS1A8MUL3 147 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 DKK1O94907 266 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 ALBP02768 609 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 GATA4P43694 442 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 FLIIQ13045 1269 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 Q8N3U1 123 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 LARGE2Q8N3Y3 721 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 CHMP7Q8WUX9 453 aaPredicted RBP8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 SUSD3Q96L08 255 aa8.02□□□□□ -1.13
TMEM50B-208ENST00000474272 ADH7P40394 386 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 C1orf53Q5VUE5 145 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 MICALL1Q8N3F8 863 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 BHMTQ93088 406 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 TFIP11Q9UBB9 837 aaKnown RBP8.01□□□□□ -1.13
TMEM50B-208ENST00000474272 ATAD2Q6PL18 1390 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 RASA1P20936 1047 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 TYRO3Q06418 890 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
TMEM50B-208ENST00000474272 TNFRSF25Q93038 417 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 CHMP3Q9Y3E7 222 aa8□□□□□ -1.13
TMEM50B-208ENST00000474272 GPC6Q9Y625 555 aaPredicted RBP8□□□□□ -1.13
TMEM50B-208ENST00000474272 HIRAP54198 1017 aaPredicted RBP7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 GRIK4Q16099 956 aa7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 POTEAQ6S8J7 498 aa7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 ALDH16A1Q8IZ83 802 aa7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 SIX5Q8N196 739 aa7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 ANKIB1Q9P2G1 1089 aa7.99□□□□□ -1.13
TMEM50B-208ENST00000474272 PRRT3Q5FWE3 981 aa7.98□□□□□ -1.13
TMEM50B-208ENST00000474272 GLMNQ92990 594 aa7.98□□□□□ -1.13
TMEM50B-208ENST00000474272 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
TMEM50B-208ENST00000474272 M0R2N6 131 aa7.97□□□□□ -1.13
TMEM50B-208ENST00000474272 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
TMEM50B-208ENST00000474272 HINFPQ9BQA5 517 aa7.97□□□□□ -1.13
TMEM50B-208ENST00000474272 C2orf49Q9BVC5 232 aaPredicted RBP7.97□□□□□ -1.13
TMEM50B-208ENST00000474272 SPDYE3A6NKU9 549 aa7.96□□□□□ -1.14
TMEM50B-208ENST00000474272 NID1P14543 1247 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms