RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 OSBPL3Q9H4L5 887 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 BRPF3Q9ULD4 1205 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
GPNMB-209ENST00000474157 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
GPNMB-209ENST00000474157 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 LILRA1O75019 489 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 CLSTN1O94985 981 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 MMP14P50281 582 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 NNTQ13423 1086 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
GPNMB-209ENST00000474157 ZNF622Q969S3 477 aaKnown RBP eCLIP9.37□□□□□ -0.91
GPNMB-209ENST00000474157 TRIM52Q96A61 297 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
GPNMB-209ENST00000474157 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
GPNMB-209ENST00000474157 GOLGA6L3A6NEY3 463 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 KCNA1Q09470 495 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 SNIP1Q8TAD8 396 aaKnown RBP9.36□□□□□ -0.91
GPNMB-209ENST00000474157 CLP1Q92989 425 aaKnown RBP9.36□□□□□ -0.91
GPNMB-209ENST00000474157 SECISBP2LQ93073 1101 aaKnown RBP9.36□□□□□ -0.91
GPNMB-209ENST00000474157 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 FER1L4A9Z1Z3 1794 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 EEA1Q15075 1411 aa9.36□□□□□ -0.91
GPNMB-209ENST00000474157 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-209ENST00000474157 GDF9O60383 454 aa9.35□□□□□ -0.91
GPNMB-209ENST00000474157 KIF20AO95235 890 aa9.35□□□□□ -0.91
GPNMB-209ENST00000474157 STAU1O95793 577 aaKnown RBP9.35□□□□□ -0.91
GPNMB-209ENST00000474157 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
GPNMB-209ENST00000474157 SCAPERQ9BY12 1400 aa9.35□□□□□ -0.91
GPNMB-209ENST00000474157 RGS17Q9UGC6 210 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-209ENST00000474157 J3QL48 77 aa9.34□□□□□ -0.91
GPNMB-209ENST00000474157 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
GPNMB-209ENST00000474157 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
GPNMB-209ENST00000474157 CYP4X1Q8N118 509 aa9.34□□□□□ -0.91
GPNMB-209ENST00000474157 SETD1BQ9UPS6 1966 aaKnown RBP9.33□□□□□ -0.92
GPNMB-209ENST00000474157 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
GPNMB-209ENST00000474157 LGR5O75473 907 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 SCNN1DP51172 638 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
GPNMB-209ENST00000474157 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 RICTORQ6R327 1708 aa9.33□□□□□ -0.92
GPNMB-209ENST00000474157 HECW1Q76N89 1606 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 SIGLEC1Q9BZZ2 1709 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 PRMT3O60678 531 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 SSFA2P28290 1259 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 RGS3P49796 1198 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 GDF10P55107 478 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 SETQ01105 290 aaPredicted RBP9.32□□□□□ -0.92
GPNMB-209ENST00000474157 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
GPNMB-209ENST00000474157 SLC20A2Q08357 652 aa9.31□□□□□ -0.92
GPNMB-209ENST00000474157 TRIM67Q6ZTA4 783 aa9.31□□□□□ -0.92
GPNMB-209ENST00000474157 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
GPNMB-209ENST00000474157 TOR4AQ9NXH8 423 aa9.31□□□□□ -0.92
GPNMB-209ENST00000474157 M0R2N6 131 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 ZIC2O95409 532 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-209ENST00000474157 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
GPNMB-209ENST00000474157 CBLBQ13191 982 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 EFCAB2Q5VUJ9 269 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 ITPKCQ96DU7 683 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-209ENST00000474157 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 IVNS1ABPQ9Y6Y0 642 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 CAMSAP1Q5T5Y3 1602 aa9.3□□□□□ -0.92
GPNMB-209ENST00000474157 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-209ENST00000474157 GNRH1P01148 92 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 INHAP05111 366 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 ADH1AP07327 375 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 SMPD1P17405 629 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 ITGAEP38570 1179 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-209ENST00000474157 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 CEP120Q8N960 986 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 RGS22Q8NE09 1264 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 GTPBP4Q9BZE4 634 aaKnown RBP9.29□□□□□ -0.92
GPNMB-209ENST00000474157 ARHGEF10LQ9HCE6 1279 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 SERTAD1Q9UHV2 236 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 CFAP74Q9C0B2 1584 aa9.29□□□□□ -0.92
GPNMB-209ENST00000474157 PRR20EP86478 221 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 PRR20CP86479 221 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 PRR20DP86480 221 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 PRR20BP86481 221 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 PRR20AP86496 221 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 OCLNQ16625 522 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 AFAP1Q8N556 730 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 KLF16Q9BXK1 252 aaPredicted RBP9.28□□□□□ -0.92
GPNMB-209ENST00000474157 TMEM51Q9NW97 253 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 CXXC1Q9P0U4 656 aaPredicted RBP9.28□□□□□ -0.92
GPNMB-209ENST00000474157 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms